Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00021 ATGGAATTTTTTTTGTATTACTCCCTTTTCACAATTATTATTGCCATTGCATTCATCATTATCACTCTCATCAAGAGAACCACAAAACTCAATAATAATAATAATAAGAAGCTTCCACCATGTCCACCAACACTTCCAATAATAGGAAACCTGTACCACTTGAAGCCCCGTCTCCACCGAACTTTTCACGCCCTTTCCCAAACCTACGGCCACATATTCTCCCTCTGGTTCGGTTCTCGCCTCGTCGTCGTTGTGTCCTGTCCAAACCTAGCCCAACAATGCCTTACCAAATACGACAGCGTTTTGGCCAACCGCCCTCGTTTTCTCACCGGAAAATACCTCTTTTATAACCATACTAGCTTGGTCTTCTCTTCCAACAACGACCACTGGCGCAACCTTCGTCGCATAGCCACCATGGACGTCCTCTCAACGCCCCGTCTCAACTCCTTCTTCGAAACTCGAAGGGATGAGGTTATCAGGTTCATAAGAAACCTAGTTGCGGACACCTCCAAGGGGTTCGCTAGGGTTCAACTGAGGCCCAGGATAGCAGAGATGTCACTCAACAATATGATGAGGATGGTCTCCGGAAAAAGGAATCAATATGGCGGGGAAGATAACGATGATTGCAGTCTCAGGGATGACAATGGAGCAGGACGGTTCAGAGATATCATCACAGAGATCCTAGATTTGGTGGATGCAAACAACAAGAGTGATTTCTTGCCTTTGCTTCGGTGGTTTGATTTTGATGGGTTTGTGAAGAGAGTGAAGAGAGTTGGTGAAGAAGCTGATGTGTTTTGGGAAGGGCTCCTTCAAGAGCATCGCAATGGGGAGCATGGTAATAACGATACCATGATACAACATCTCTTGCTTCTTCAAAAATTGCAACCTAGCTACTACACCGATCATATTATCAAAGGCCTTGTTCAGGATATGTTACTTGCTGGAACGAACACAACGGTTTTAACTATGGAGTGGACATTATCCGCTTTATTGAATCACCCGGAGATATTGAAGAAAGCAAAGGATGAAATTGACAATCACATAGGCAAAGATCGTTTACTAGATGAATCAGATATTCCGAATCTTCCATATCTTCAAAATATTATTCATGAGACACTTCGATTATACTCTCCAAGTCCATTGTTACTGCCTCATTTTTCTTCAGATGAGGTGAATATTGGAGGATTTACTATTCCACGTGACACTATAGTGTTAATTAATTCATGGGCTATGAGAAGAGATCCTAAAATTTGGGGTGATGATGTTGAATGTTTTAAGCCTGAAAGGTTTGAGAAAGAAGGGGAGGCAAACAAGTTAATGGCATTTGGATTGGGGAGAAGAGCTTGCCCTGGATATGGATTGGCAAATCGTATAATGGGCTTGACTTTGGGATTATTGGTTCAATGTTTTGAATGGAAACGACTCAATGATGAAGAAATTGATATGAGGGAGGACGAAGGTTTTACCTTTGCGAAACTAATTCCATTAGAGGCTATGTGCCAGGCAAGACCAATCAGCATGAAATTAGTTAAACATGCAATATAA 1545 0.422 MEFFLYYSLFTIIIAIAFIIITLIKRTTKLNNNNNKKLPPCPPTLPIIGNLYHLKPRLHRTFHALSQTYGHIFSLWFGSRLVVVVSCPNLAQQCLTKYDSVLANRPRFLTGKYLFYNHTSLVFSSNNDHWRNLRRIATMDVLSTPRLNSFFETRRDEVIRFIRNLVADTSKGFARVQLRPRIAEMSLNNMMRMVSGKRNQYGGEDNDDCSLRDDNGAGRFRDIITEILDLVDANNKSDFLPLLRWFDFDGFVKRVKRVGEEADVFWEGLLQEHRNGEHGNNDTMIQHLLLLQKLQPSYYTDHIIKGLVQDMLLAGTNTTVLTMEWTLSALLNHPEILKKAKDEIDNHIGKDRLLDESDIPNLPYLQNIIHETLRLYSPSPLLLPHFSSDEVNIGGFTIPRDTIVLINSWAMRRDPKIWGDDVECFKPERFEKEGEANKLMAFGLGRRACPGYGLANRIMGLTLGLLVQCFEWKRLNDEEIDMREDEGFTFAKLIPLEAMCQARPISMKLVKHAI 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00021 514 PRINTS P450 superfamily signature 314 331 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 Gene3D Cytochrome P450 23 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 CDD CYP81 70 496 - -
Stsc271919g00021 514 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 303 320 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 323 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 FunFam Cytochrome P450 family protein 30 506 - -
Stsc271919g00021 514 Pfam Cytochrome P450 39 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 SUPERFAMILY Cytochrome P450 39 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00021 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Stsc271919g00021 514 PANTHER CYTOCHROME P450 82C3-RELATED 16 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00021 Stsc-Chr271919 99592 101668 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00021 6 510 Cytochrome P450 AT4G37330 50.591 2.12e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00021 K13260 K22932 gmx:100784120 644.81