Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00020 ATGGCAGCTTTGCAGTTTTTGTATTACTCCCTCCTTTCACTAGCTTTCTTCCTATTCATTCTCAAGAAGCTCTTCTTCAAAAACACAAGAAGCTTCTCCAACAACCTCCCACCTTCTCCTCCAACAATTCCGATCATCGGAAACCTCCACCACCTCAAATCCCCACTCCACCGCTCCATCTACGCCCTATCACAAACCTACGGCCACATATTCTCCCTTTGGATTGGTTCACAGCTTGTTGTTGTTGTCTCCTCCCAAACCCTAGTGCAACAATGCTTCACCAAATACGACATCGTTTTAGCCAACAGAGCGCGCAATCTCGTCGGAAAGTACCTCTTTTACGACTGCACCACCTTGGGCGCCTCCTCTTACGGCGACCACTGGCGGAACCTTCGCCGCATCGCCACCACCGACGTCCTCTCCACGCACCGCATAAACTCCTTCGTGGAAACACGAAAAGATGAAACGTTGAGGGTGATAAAGGATTTGGTTGAGGAAACGTGCACGGGGTTCAGTAGGGTTAAATTGAGGCCATGGCTTTCCAAGATCTCGTTCAACAGCATGATGAGAATGATCTCCGGGAAGAGGTACTACGGCGATGACGTGGCGGATACGGAGGAAGCGAAGAAGTTCAGGGAGACGATAGCGGAGATACTGTCGTTGATAGGTGCTAGCAAGGTGGTTGACTTTTTTCCGTTGCTGCGGTGGTTTGACTTTGACGGTTTGGAGAAGAGGCTGAAGAGGGTTAAGAAGAGCGCTGATGAATTCTTGCAGGGTCTAATTGATGAGCACCGTAATGGGGAGGATCATAACAAGAAAACCATGATTGGGAATCTCTTAACTCAGCAAAAATTGCACCCACAGTACTACTCTGATTTTATAATCAAAGGCCTTATTCAGGATATGCTTATTGGTGGAACGGACACAACAGCTGTGACAATGGAGTGGGCAATGGCTGCTCTATTAAATCATCCACAGATATTCAAGAAAGCAAAGAGTGAATTGGATACCATTGTAGGCAAAGATCGCTTGGTAGATGAATCAGACATTCCAAATCTTCCATACATTCAAAACATTGTCTACGAGACACTTCGTTTGTACACTCCAGGCCCATTGCTATTGCCTCATGTATCTTCAGAAGAGTTCAACATTGAAGGGTTCACAATTCCACGTGGCACTATACTATTGACCAATGCATGGACCATTCATAGAGATCCTAAAGTTTGGGGGGATGATGCCGAATGCTTTAAGCCTGAGAGGTTTGAAAAAGATGGAGAATCAAATAAGTTACTTGCGTTTGGATTGGGAAGGAGAGCTTGCCCTGGATTAGGGTTAGCATATCGTACAATGGTTTTAACTTTGGGATTATTGATTCAGTGCTTTGAATGGAAAACATTAAGAGATAATGAAGAAATTGATATGAGGGAAGATGAAGGAGCTGCCACACCAAAATTAATTCCATTGGAGGCCATGTGTAAAGCACAACCAATCAGCAACAGAATCAAGATATAA 1512 0.4504 MAALQFLYYSLLSLAFFLFILKKLFFKNTRSFSNNLPPSPPTIPIIGNLHHLKSPLHRSIYALSQTYGHIFSLWIGSQLVVVVSSQTLVQQCFTKYDIVLANRARNLVGKYLFYDCTTLGASSYGDHWRNLRRIATTDVLSTHRINSFVETRKDETLRVIKDLVEETCTGFSRVKLRPWLSKISFNSMMRMISGKRYYGDDVADTEEAKKFRETIAEILSLIGASKVVDFFPLLRWFDFDGLEKRLKRVKKSADEFLQGLIDEHRNGEDHNKKTMIGNLLTQQKLHPQYYSDFIIKGLIQDMLIGGTDTTAVTMEWAMAALLNHPQIFKKAKSELDTIVGKDRLVDESDIPNLPYIQNIVYETLRLYTPGPLLLPHVSSEEFNIEGFTIPRGTILLTNAWTIHRDPKVWGDDAECFKPERFEKDGESNKLLAFGLGRRACPGLGLAYRTMVLTLGLLIQCFEWKTLRDNEEIDMREDEGAATPKLIPLEAMCKAQPISNRIKI 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00020 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Stsc271919g00020 503 Pfam Cytochrome P450 37 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 Gene3D Cytochrome P450 23 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 CDD CYP81 68 488 - -
Stsc271919g00020 503 SUPERFAMILY Cytochrome P450 37 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 FunFam Cytochrome P450 family protein 27 498 - -
Stsc271919g00020 503 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271919g00020 503 PANTHER CYTOCHROME P450 82C3-RELATED 15 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00020 Stsc-Chr271919 89916 92393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00020 6 501 Cytochrome P450 AT4G37340 51.600 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00020 K13260 K22932 gmx:100784120 654.44