Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271919g00005 ATGGCTGAATTAACTCTGCCTCCCACACCACCTCATTATCATGAACAAGAAAGCACAGGCAATGGTGGTTTGGATTGGAGTGTTGTAGGGGCGGCCATAGTGTGTGCCTTGCTGTGCGTTCTAGGCCTCAACACCATGCTAAGATGTGCGTTTCGGTGTGCTGCACGTCTCCTCACCAACCCTCTTCAATGGATCGCTTCGAGGAGGCTCAATTCCGGTCTCAAGACCAACGACATGGTGGCTCTTCCTACCTCAACTTACTCTTCTTCTTCTCAAGATCCTAACAACTGTGCAATTTGCTTAGCTGAGTTCAGGGATGACACCTCCTCATCAACTCCAACGCTCATTCGCTTCACTCTTTACAAATTCTCTTAG 375 0.488 MAELTLPPTPPHYHEQESTGNGGLDWSVVGAAIVCALLCVLGLNTMLRCAFRCAARLLTNPLQWIASRRLNSGLKTNDMVALPTSTYSSSSQDPNNCAICLAEFRDDTSSSTPTLIRFTLYKFS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271919g00005 124 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 18 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271919g00005 Stsc-Chr271919 30333 30804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271919g00005 10 106 C3H Transcription Factor Family AT2G17450 32.075 1.67e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271919g00005 - - gmx:100779286 122.094