Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271918g00003 ATGGGCCGTGCAAAAACAGAATTGAAGTGTCTCACAAGTTTGAGAGATCGAAAAGGAAGATTCAAGACAAGAATCAAGGGACTAGAGAGCAAATTGAAGAAATTTTCTGACACATGTGAAGGATCCAAAGCAAGCTTGATAGTTTATGAAGAAGATAGCAATGCTGCACGGATGATTTGGCCAAAAGATTCTGCAAAAGTCAGTTTCTTGATTGAAAAGTACGAGACTCAAAAGAATGTGAAGCCTTATAAGATATTTGATCTAGAAGATTTCTTCAAGCATAAGAAGACCTCAATTGAAATCGAAATTTTGAAAGCGCAAAAATGCATCCGGAACTTTAAGTATCCCACTTCTGACTTGAATATTCAAAGTTTAGATTTGGAACAATTGAGGATGTTCATAGGTATATTGGATAACAAGATAGGTGCTTGTGTTGAAAGAATTAACATGCTGAAAAGTTATCAAAAAGTTGAAAGTAACTTCAATTTTGGGCACAATAGTAATCAATACAACTTTCTGCTTTATCCAATTCTTATGGAATTGATGGGAAGTAATCATGGGACTTGTCAAAACTTGATCAAGATGAAGCTCGGAACTTTCAATATCAAGTGGGTTCCTCTGTGGCCAACTCTCCACCAGTTCAACAGCCCTATGGAGCAGAATTCTATGCAAACTATGTGTCATTCTCCTGGTCCTGCCTCTAGGATCATGAGCCCAACAACTGGTAGCCACTCACCTGAGCAGAATTCTATGCAAACTATCTCCGGGCTGGCTTCGATTTCGCAACCTCAGGTATCGAATACTGCGCAGGCTGAAACTATTGGCAAATACTTTGGAAGAAGCAATCCCGGCGAGCATATGAAGGACCCGGTTCACTATGGTAATACTAACAAGAAAGATGAAGTTAGCGAGGCTTTGGATTGGGAAACTCAACTTGCAGAGGCTCAGGCTTGGGCTAGTGACTTTGGAGAGTTTGAGAATTTGATGAATCAACAAAATGAGCATTTGGATTTATTATACAATACATATGATTATAAGTTTCTAAGTTAG 1050 0.3876 MGRAKTELKCLTSLRDRKGRFKTRIKGLESKLKKFSDTCEGSKASLIVYEEDSNAARMIWPKDSAKVSFLIEKYETQKNVKPYKIFDLEDFFKHKKTSIEIEILKAQKCIRNFKYPTSDLNIQSLDLEQLRMFIGILDNKIGACVERINMLKSYQKVESNFNFGHNSNQYNFLLYPILMELMGSNHGTCQNLIKMKLGTFNIKWVPLWPTLHQFNSPMEQNSMQTMCHSPGPASRIMSPTTGSHSPEQNSMQTISGLASISQPQVSNTAQAETIGKYFGRSNPGEHMKDPVHYGNTNKKDEVSEALDWETQLAEAQAWASDFGEFENLMNQQNEHLDLLYNTYDYKFLS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271918g00003 349 SUPERFAMILY SRF-like 1 79 IPR036879 GO:0003677|GO:0046983
Stsc271918g00003 349 ProSiteProfiles MADS-box domain profile. 1 48 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271918g00003 Stsc-Chr271918 7732 9066 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271918g00003 1 147 Type I MADS-box Gene Family AT5G55690 25.658 1.49e-08 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271918g00003 - - adu:107479968 313.538