Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271916g00001 ATGGATAACAATACCTGGGTTGTGTTTGTGATGATAATATTATCATTGGTGATCTTTTTCTACAAGAGCAGGATTAATAATAAGCTAAAATCAAAACACAGTGATCATCATCATCAGCTTCCATTAGGGACTCTTGGATGGCCACTTATTGGAGAAACCATTCAATTTGTTTCTTCTGCTTACTCCAATCGCCCAGAGAGCTTCGTCGATAAGCGCCGCCGCTCATACGGGAAGGTGTTTAAGTCACACATATTTGGAAGCCCAACAATAATTTCAACAGATGCAGATGTAAATAAATTCATACTGCAAAGTGATGCAAAGCTTTTTGTTCCTTCTTATCCCAAGTCTGTGACAGAGTTAATGGGAAAGTCTTCTATTTTGCTTGTCAATGGAAGCATTCAAAGGAGAATACATGGACTCCTTGGATCTTTCTTCAAGTCTCAGATTATCAAGGCTCAGATTACTACAGATATGCATAACTATGTTAAAGAATCCATGGCAAATTGGAGTGAGGAATCCCCTATATACATACAAGATGAAACAAAAAAGATTGCTTTTCAATTGTTAGTGAAGGCATTGATTAGTTTGAATCCAAGTGAAGAGATGGAGATTATAAGGAAATATTTTCAAGAATTCATCTCTGGCATTATGTCTTTACCCATTAACCTACCAGGAACTCAACTTCATCAATCTTTACAAGCGAAAAAGAAAATGGTGAAATTAGTGTTAAGAATAATCAAAGATAGAAGAAAGAATGGCATCACCGAAGTTCCAAAAGATGTATTAGATGTGCTTGTTAATGATTCAAGTGAGGAATTAACAGATGATTTGATAGCACATAATATTATAGATATGATGATTCCTGGAGAAGACTCAGTTCCACTTCTTATCACATTAGCTATAAAGTATTTATCTGAACTCCCTGCTGCTTTGCAACAATTAACGGAGGAAAATATGAAGCTTAAGAAACAGAAATATCATCTTGGAGAGACCTTGTCTTGGAGCGACTACTTATCATTGTCATTCACTCAATTAGTTATCACAGAAACTCTGAGAATGGGAAATATTATAATTGGGGCTCTGAGAAAGGCAACAAAAGATGTTAAAATAAAAGGGTACTTAATACCAAAAGGGTGGTGTGTTCTTGCAAATTTTAGATCAGTTCATCTAGATGAAAAAAACTATGACAATCCATATCAATTCAATCCATGGAGGTGGCAAGACAAAGAGTTAAGCAATTGCAATTTCACACCTTTTGGAGGTGGACAAAGGCTGTGCCCTGGGCTTGACTTAGCTAGGCTTGAAGCTTCTATATTCCTACACCACTTTGTTACTCAGTTCAGATGGTATGCTGAAGAAGATACAATAGTGAACTTCCCCACTGTAAGAATGAAAAGGAAGATGCCTATCTTTGTAAAGAGAGTTGAATCTTGA 1434 0.3626 MDNNTWVVFVMIILSLVIFFYKSRINNKLKSKHSDHHHQLPLGTLGWPLIGETIQFVSSAYSNRPESFVDKRRRSYGKVFKSHIFGSPTIISTDADVNKFILQSDAKLFVPSYPKSVTELMGKSSILLVNGSIQRRIHGLLGSFFKSQIIKAQITTDMHNYVKESMANWSEESPIYIQDETKKIAFQLLVKALISLNPSEEMEIIRKYFQEFISGIMSLPINLPGTQLHQSLQAKKKMVKLVLRIIKDRRKNGITEVPKDVLDVLVNDSSEELTDDLIAHNIIDMMIPGEDSVPLLITLAIKYLSELPAALQQLTEENMKLKKQKYHLGETLSWSDYLSLSFTQLVITETLRMGNIIIGALRKATKDVKIKGYLIPKGWCVLANFRSVHLDEKNYDNPYQFNPWRWQDKELSNCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTQFRWYAEEDTIVNFPTVRMKRKMPIFVKRVES 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271916g00001 477 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 30 475 - -
Stsc271916g00001 477 SUPERFAMILY Cytochrome P450 36 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 Coils Coil 304 324 - -
Stsc271916g00001 477 PANTHER CYTOCHROME P450 26 37 450 - -
Stsc271916g00001 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Stsc271916g00001 477 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 CDD CYP90-like 72 474 - -
Stsc271916g00001 477 Gene3D Cytochrome P450 29 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271916g00001 477 Pfam Cytochrome P450 41 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271916g00001 Stsc-Chr271916 757 5016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271916g00001 30 448 Cytochrome P450 AT3G13730 64.965 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271916g00001 K12638 - gmx:100782687 752.666