Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271914g00016 ATGGCGACTGTAACAACACAGGCTTCAGCTACTGTTTTCAGGCCATGCCCTTCTTCCAAGACAAGGTTCCTCTCTGGCTCGTCTGTTAGACTCAACAGGGAAGTGTCTTTTAAGGCTCCTCATTCTTCTTCATTGAAGGTGGAAGCCAAGAAAGGAGAGTGGTTGCCTGGCTTGGCCTCCCCAACTTATCTAAATGGAAGTCTTCCGGGAGACAACGGATTCGATCCACTGGGGCTAGCAGAGGACCCAGAGAACTTGAAGTGGTTCGTACAGGCAGAGCTGGTGAATGGGAGATGGGCGATGCTCGGGGTGGCAGGGATGCTGCTTCCGGAGGTGTTCACGAACATAGGGATCATAAATGTTCCAAAATGGTACGACGCAGGAAAGGAAGAGTACTTCGCATCATCCTCCACCCTCTTTGTGATTGAGTTCATCCTCTTCCATTACGTTGAGATCAGGAGATGGCAGGACATCAAGAACCCCGGAAGTGTGAACCAAGACCCCATCTTCAAGCAGTACAGCCTCCCACCAAACGAGGTCGGCTACCCTGGTGGCATCTTCAACCCCCTCAACTTCGCCCCTACTCTGGAGGCCAAGGAGAAGGAGCTTGCCAATGGGCGTTTGGCTATGCTCGCATTCTTGGGTTTTGTTGTTCAGCACAACGTCACTGGCAAAGGCCCCTTTGACAACCTCTTGCAGCACATCTCTGACCCTTGGCACAACACCATTGTCCAAACACTCTCTTCTAATTAA 753 0.5139 MATVTTQASATVFRPCPSSKTRFLSGSSVRLNREVSFKAPHSSSLKVEAKKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFDNLLQHISDPWHNTIVQTLSSN 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271914g00016 250 Gene3D Chlorophyll a/b binding protein domain 61 240 - -
Stsc271914g00016 250 SUPERFAMILY Chlorophyll a-b binding protein 51 248 - -
Stsc271914g00016 250 FunFam Chlorophyll a-b binding protein, chloroplastic 61 240 - -
Stsc271914g00016 250 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 18 246 IPR001344 GO:0009765|GO:0016020
Stsc271914g00016 250 Pfam Chlorophyll A-B binding protein 61 220 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271914g00016 Stsc-Chr271914 62304 63274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271914g00016 44 248 Chloroplast and Mitochondria Gene Families AT3G61470 52.133 7.83e-75 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271914g00016 K08910 - rcu:8263414 469.929