Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271914g00014 ATGGACACCAAGTTCTGCTACTACAACAACTATAACGTGAACCAGCCACGCTACTTCTGCAAAGCCTGCCAAAGATACTGGACAGCAGGCGGCACCATGAGGAATGTCCCCGTTGGGGCAGGCAGGAGAAAGAACAAGAACACCTCCTCCTCGCACTATCGCCACATCACCATCTCTCAGGCTCTTCAAGCACCTACCAATTCCACACTCCTAAGCTTTGGATTGGATACACCATCACCCAATCCCATATGTGAGCCTTGCAAAACTGGAGACAATAATGGTGATGACTGCTCAACTGCATCTTCAATTACCATGGACGAAACAGCATCTCAAGAGCCTTTACCACAAGCCAATGGATTCATTCCTCCCCAAGTACAAGTACAATTGCCATGGCCTTTCTCTCCTCCTGGATTTCCCATTTCATTCTACCCTGCGCCTTTTTGGAATTGGAATGTTCCCTGCTTCCCCTCGCATCCATATACACCAAATCAAAACTCTTGGAATTCTCCAACCCTAGGGAAGCACTCCAGGGATGCTGATAGAAATGGGTGTGTTTTGGTTCCCAAAACTTTAAGAATTGATGATCCAATTGAAGCTGCAAAGAGTTCTATATGGGCAACTCTAGGAATCAAGAATGAAGGTGTCAGTTTTAAGGCCTTCCAATCAAAGAAGGAAGAGAAGAACAAAGTTGTTGAAACCTCTCCGATGCTGCTGGCTAACCCTGCAGCCTTGTGTAGATCCCTTCATTTTCATGAGAACTCCTGA 765 0.4627 MDTKFCYYNNYNVNQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNTSSSHYRHITISQALQAPTNSTLLSFGLDTPSPNPICEPCKTGDNNGDDCSTASSITMDETASQEPLPQANGFIPPQVQVQLPWPFSPPGFPISFYPAPFWNWNVPCFPSHPYTPNQNSWNSPTLGKHSRDADRNGCVLVPKTLRIDDPIEAAKSSIWATLGIKNEGVSFKAFQSKKEEKNKVVETSPMLLANPAALCRSLHFHENS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271914g00014 254 PANTHER CYCLIC DOF FACTOR 2 1 254 IPR045174 GO:0003700|GO:0006355
Stsc271914g00014 254 ProSiteProfiles Zinc finger Dof-type profile. 1 47 IPR003851 GO:0003677|GO:0006355
Stsc271914g00014 254 Pfam Dof domain, zinc finger 1 47 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271914g00014 Stsc-Chr271914 51890 53719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271914g00014 1 252 C2C2-Dof Transcription Factor Family AT3G47500 46.108 3.86e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Stsc271914g00014 zf-Dof 5.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271914g00014 - - aip:107629495 362.459