Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271912g00002 ATGGCGGTTTCCTTCGCAGCCTTGAACCTTCGGAGCATGGCTCTCCGATCATCATCGAAGCTTCTCCCTCGTTCTTATTCTCATCTTCTCCCTATTCACATGCAGCATTCAGCTCCACCCCTCACTCGAAAGTTAAGCGTGGATGCTAGGAGCATCGCTTCCCAGCTTAATAGCTCTGGTTTGTTGAAAACTCAGGGCCTTATTGGAGGTAAATGGAGTGATTCCTATGATGGGAAAACCATACAGGTTTATAATCCAGCAACGGGTGAATCTATAGCAGATGTTGCGTGCATGGGTCAAAAAGAGACAAACGATGCGATTGCTTCAGCATACGATGCTTATAAATCATGGAGCAAAACCACTGCTGCTGAGAGAAGCAAACTTCTGAGGAAATGGTATGATTTACTAATAGCTCATAAAGAACAGCTAGCTCAACTTATGACCTTGGAGCAAGGAAAGCCTCTTAAGGAGTCTATGGGTAAACTATGGGGCTGGCTTTATTGA 504 0.4504 MAVSFAALNLRSMALRSSSKLLPRSYSHLLPIHMQHSAPPLTRKLSVDARSIASQLNSSGLLKTQGLIGGKWSDSYDGKTIQVYNPATGESIADVACMGQKETNDAIASAYDAYKSWSKTTAAERSKLLRKWYDLLIAHKEQLAQLMTLEQGKPLKESMGKLWGWLY 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271912g00002 167 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 164 IPR016162 GO:0016491
Stsc271912g00002 167 SUPERFAMILY ALDH-like 52 162 IPR016161 GO:0016491
Stsc271912g00002 167 Pfam Aldehyde dehydrogenase family 72 160 IPR015590 GO:0016491
Stsc271912g00002 167 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 58 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271912g00002 Stsc-Chr271912 13249 16989 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271912g00002 43 162 Aldehyde Dehydrogenase Gene Family AT1G79440 73.333 3.69e-60 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271912g00002 K17761 - gmx:100808318 242.662