Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271911g00012 ATGGGTTCAATTGGAACCGAAAGCCCAAGGGTTGAGGTTGCAACCATTGATGTAACTGCAACTAAGGGTCTTATTCAGAATGGCCATGTTTATCTAGATGTTAGGACTGTGGAAGAGTTTGAGAAAGGGCATGTGGATGCAGAGAAGATTATCAATATTCCATACATGTTTAATACACCACAGGGAAGAGTGAAGAACCCAGAGTTTCTAAAAGAGGTTTCATCTGCTTGTAAGAAAGAAGATCATATCATTGTGGGTTGTCAGAGTGGGGTGAGGTCTCTTTATGCAACTGCTGATCTTCTTGCTGAGGGTTATAAGGATGTGAATAACATGGGAGGAGGTTATTTGGATTGGATCAAGAATGAATTTCCAGTAAAAGCACCACCAAAAGTGAAAAATGATCTCTAA 408 0.402 MGSIGTESPRVEVATIDVTATKGLIQNGHVYLDVRTVEEFEKGHVDAEKIINIPYMFNTPQGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLAEGYKDVNNMGGGYLDWIKNEFPVKAPPKVKNDL 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271911g00012 135 PANTHER THIOSULFATE SULFURTRANSFERASE 18 6 133 IPR044684 GO:0003824
Stsc271911g00012 135 SMART rhod_4 16 124 IPR001763 -
Stsc271911g00012 135 Pfam Rhodanese-like domain 25 120 IPR001763 -
Stsc271911g00012 135 CDD RHOD 19 118 - -
Stsc271911g00012 135 Gene3D - 6 127 IPR036873 -
Stsc271911g00012 135 ProSiteProfiles Rhodanese domain profile. 25 127 IPR001763 -
Stsc271911g00012 135 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271911g00012 Stsc-Chr271911 77568 79456 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271911g00012 3 125 Sulfurtransferasese or Rhodanese AT5G66170 58.537 1.25e-52 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271911g00012 - K15692 gmx:100792251 231.876