Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271911g00002 ATGAGGCCATCATCATCACTAATCTTGCAAAAGGTTCTTCTTTCTCAATTTCCTCAAGCAATCCTTTGGTGTGGTTCTTCCATGGTCATCATTGCCCTCATCATCATATTCCAACATGTTTCAGCTGGAAATCTACCAAACAATGAAACTGTGCCTGCAGTGATTGTGTTTGGAGACTCCATAGTTGATTCCGGAAACAACAACTATATAAATACTATTGTCAAGTGTGATTTTTCACCGTATGGAAGAGATTTCGGTAGCGGAGATAATCCAACCGGAAGATTCAGCAATGGCTTAGTCCCATCTGACATCATTGCTGCAAAATTCGGAGTTAAAAGCCTTTTACCGCCTTATCTTGATCCGAATTTGAAACTCGAAGATCTTCTCACCGGTGTAAGCTTTGCCTCGGGTGGTGCCGGATATGATCCTCTAACATCCAAATTAATGTCTGTGATATCATTAACAGACCAATTAAACATGTTCAAGGAGTACATAAACAAGATTAAGGAAGGAGTTGGAGAAAACAGAACATCAATGATAGTATCAAAGAGTATATACATAGTTTGCATAGGAAGTGATGACATTGCCAACACTTATGTTCAGACACCATTTAGGAAAATTCAGTATGATATTCCATCATACACAGATTTTATGGCTTCTCAAGCCTCAATGTTCCTTCAGGAACTTTATGAATTAGGAGCAAGAAGAATTGGAGTGTTTAGTGTACCAGTTATAGGTTGTGTACCCTCACAAAGAACAATTGGTGGAGGCATCCTTAGAACATGTTCAGATTCTTCAAACCAAGCAGCAATTCTCTTTAACTCAAAGCTCTCCAAACAAATGGATGCACTTCAGATGAACTTTCCAGATGCTAGATTTGTCTATCTTGATTCCTACAATCCATTCCTTGACATGCTTCAAAACCCCACTAAATATGGTTTTGGAGAGGTGGAGAAAGGATGCTGTGGCACAGGGAACATAGAAGTGAGCATATTATGCAACCGTTACAGCCTTAACACATGCTCCAATGACTCTGATTATATTTTCTGGGATAGTTATCATCCTACTCAGAAGGCTTATTTTGTCCTTAGTTCTTTGATTCTTGATAACAAGGTCAAGGACTTCTTTTGA 1131 0.389 MRPSSSLILQKVLLSQFPQAILWCGSSMVIIALIIIFQHVSAGNLPNNETVPAVIVFGDSIVDSGNNNYINTIVKCDFSPYGRDFGSGDNPTGRFSNGLVPSDIIAAKFGVKSLLPPYLDPNLKLEDLLTGVSFASGGAGYDPLTSKLMSVISLTDQLNMFKEYINKIKEGVGENRTSMIVSKSIYIVCIGSDDIANTYVQTPFRKIQYDIPSYTDFMASQASMFLQELYELGARRIGVFSVPVIGCVPSQRTIGGGILRTCSDSSNQAAILFNSKLSKQMDALQMNFPDARFVYLDSYNPFLDMLQNPTKYGFGEVEKGCCGTGNIEVSILCNRYSLNTCSNDSDYIFWDSYHPTQKAYFVLSSLILDNKVKDFF 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271911g00002 376 CDD SGNH_plant_lipase_like 52 370 IPR035669 -
Stsc271911g00002 376 SUPERFAMILY SGNH hydrolase 53 369 - -
Stsc271911g00002 376 Gene3D SGNH hydrolase 40 372 IPR036514 -
Stsc271911g00002 376 FunFam GDSL esterase/lipase APG 43 372 - -
Stsc271911g00002 376 Pfam GDSL-like Lipase/Acylhydrolase 54 366 IPR001087 GO:0016788
Stsc271911g00002 376 PANTHER GDSL ESTERASE/LIPASE EXL3 34 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271911g00002 Stsc-Chr271911 4575 8626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271911g00002 48 370 Pollen Coat Proteome AT1G75910 40.491 2.60e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271911g00002 - - ahf:112723705 677.167