Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271910g00002 ATGGAACAATTTAGACAGATTGGTGAGGCATTGGGGAGTTTGAAGGCTTTGATGTTATTCAAAGAGAAAATTCAAATCAATCAAAGACAGTGTTGTCTTCTTCTTGATGTGTTCACCTTTGCATATGATACTATTGCAGATGAGATCAAACACAACCTCAAATTTGAAGAGAGGAATGTGAAATGGAAAGGATTAGAACAACCTTTGAAGGAGATTCATAAGATCTTCAAAGAAGGCGAATCGTATGTTAGGAATTGTTTGGAAACAAAGGATTGGTGGGCTAAGGCCGGTGAAACTTTAGGGATCGATCAGGACGACACGAGTAAGAGGAAGTTAATAAATTCTTACAAGTTCAGAAAAGAGTTTAGAGATATGAACATTTTTCAATGGAAATTTGGGAAACAGTACTTGATTACTTCGGAGTTGTGCAACCGATACGAAACGGTTTGGAAGGAGGACAGGTGGTTACTTCAACAGAAAATGCATGAGAAGAAGATGGCAGGCACAACAAAGCAAGAGAAGAGATTGATAGAACTCATTTTGAAGAATTTGCAAGAATCATGTGAAGTGAAGCTTATTCCAAGTTCAACATTGGTTGGATCTAAGGACTTTCAGGTTAAGAGAAGGATGGGGAATGGACAGTACAAGGAGATTTCGTGGTTAGGCGAAAGCTTCGTGATAAAGCATTTTACCGGGGAAATCGAAGCTATGGAGCCGGAGATTAGAGAAGTTTTGTCTCTTTCCCATCCAAACATAATGGATTGTCTTTGTGGTTTCACTGATGATGACAAGAAAGAATGTTTTCTGCTTATGGAGCTTATGAGCAAAACATTGAGCACTCACATCAAGGAGATTCATGGCCCGAGGAAGCAAAAACCGTTCTTGCTCCATGTCGCGATCGATGTTCTGCTTCAGATCGCGAGAGGAATGGAATACCAGCATTCAAAGAAAGTTTATCATGGAGAGCTAAATCCTTCAAACATTCTTGTTAAGCCAAAAGGTAACTTGACTGATGGTTACTTGCACGCCAAGGTAACTGGTTTTCGCCTATCTTCGGCTGTGGAATTGCCCCAGAAAGGAGGTACAAGTCAAAATCAGAATGGATCTTCATTGTTCATCTGGTATGCTCCAGAAGTACTTGAAGAGCAGGAAAATTCCGGGGGTACCTTCCAATCCAAGTATTCAGAGAAATCTGATGTTTATAGCTTCGGAATGGTTTGCTTCGAGCTTCTAACAGGTAAAGTCCCTTTTGAAGATAGTCATCTGCAAGGAGAGAAGATGAGCAGGAATATAAGGGCAGGGGAGAGGCCACTTTTCTCCCCGAATTCGCCGAAATATATCATCAACTTGACAAAGAAATGTTGGCACACTGAACCAGATCAACGACCGAGCTTCTCTTCCATCTGTAGAATTCTCCAATACATAAAGCGGTTTCTTGCAATGAATCATAGTCATATCACCCAGTTAGAAGCCCTGGTACCAACTCCAGCCGTAGATTATTGTGACATAGAGTCTGCACTTTTGAAGAAGTTTCCTTCTTGGGGGAGTTCTGAATCTACATCGATATCACAAATTCCGTTTCAAATGTTTTCCTATCGAGTCGCAGAGCGAGGGAAAATAGGTACATCCTCTAAGGAGAACTCAGAATCCGAAAGCGACAGGTCAGCGGGCGGCGATGATCTTACTACCTCTGGAGACGAGGCGTTCCTATCATCAGAAAAGAAGACTAATCCTGCAAATGACAGTACAAGCATCAAGAAGCATTCACTAATCAAGAAATCATTGGACTTTAATAAGCCTATAAAACAACAAGTTACACCAAGATCAGCAAGACCTCCACAAATGTCGTCTTATGTGAGACCAAAGAGGGTTAGTTCAGATCTCCCCCTAACATCGAATCCAAGAACGAGAAGAACAACTTCCGGCCACGTCTCGGATTCGGAGCTTTCTTAG 1953 0.4158 MEQFRQIGEALGSLKALMLFKEKIQINQRQCCLLLDVFTFAYDTIADEIKHNLKFEERNVKWKGLEQPLKEIHKIFKEGESYVRNCLETKDWWAKAGETLGIDQDDTSKRKLINSYKFRKEFRDMNIFQWKFGKQYLITSELCNRYETVWKEDRWLLQQKMHEKKMAGTTKQEKRLIELILKNLQESCEVKLIPSSTLVGSKDFQVKRRMGNGQYKEISWLGESFVIKHFTGEIEAMEPEIREVLSLSHPNIMDCLCGFTDDDKKECFLLMELMSKTLSTHIKEIHGPRKQKPFLLHVAIDVLLQIARGMEYQHSKKVYHGELNPSNILVKPKGNLTDGYLHAKVTGFRLSSAVELPQKGGTSQNQNGSSLFIWYAPEVLEEQENSGGTFQSKYSEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFSPNSPKYIINLTKKCWHTEPDQRPSFSSICRILQYIKRFLAMNHSHITQLEALVPTPAVDYCDIESALLKKFPSWGSSESTSISQIPFQMFSYRVAERGKIGTSSKENSESESDRSAGGDDLTTSGDEAFLSSEKKTNPANDSTSIKKHSLIKKSLDFNKPIKQQVTPRSARPPQMSSYVRPKRVSSDLPLTSNPRTRRTTSGHVSDSELS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271910g00002 650 Pfam Protein tyrosine and serine/threonine kinase 234 471 IPR001245 GO:0004672|GO:0006468
Stsc271910g00002 650 MobiDBLite consensus disorder prediction 565 585 - -
Stsc271910g00002 650 ProSiteProfiles Protein kinase domain profile. 204 475 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271910g00002 650 MobiDBLite consensus disorder prediction 599 613 - -
Stsc271910g00002 650 Gene3D Transferase(Phosphotransferase) domain 1 182 492 - -
Stsc271910g00002 650 MobiDBLite consensus disorder prediction 539 556 - -
Stsc271910g00002 650 FunFam Kinase family protein 201 485 - -
Stsc271910g00002 650 MobiDBLite consensus disorder prediction 626 650 - -
Stsc271910g00002 650 PANTHER SERINE-THREONINE PROTEIN KINASE 229 476 - -
Stsc271910g00002 650 SUPERFAMILY Protein kinase-like (PK-like) 195 483 IPR011009 -
Stsc271910g00002 650 MobiDBLite consensus disorder prediction 539 650 - -
Stsc271910g00002 650 Pfam Protein of unknown function (DUF1221) 96 201 IPR010632 -
Stsc271910g00002 650 Pfam Protein of unknown function (DUF1221) 21 96 IPR010632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271910g00002 Stsc-Chr271910 15555 17754 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271910g00002 203 483 MAP Kinase Kinase Kinase AT1G14000 27.797 8.28e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Stsc271910g00002 PK_Tyr_Ser-Thr 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271910g00002 - - gmx:100813704 903.664