Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271909g00010 ATGAGTGATTCTAGTTCTACAGTGAAGAATTCTTCTTCATGTTTGGCCATTGCTGAGAAGAAGGCACAGAAGCCAGGTGGCTGTTCTGGCATTTTCTTTCAGCTCTTTGAATGGAAGAGGAAGCTTGCAAAGAAGAAGCTCTTCTCTAAGAAGCTTCTGCCTCCTGCTCGTGCTAAAAGGTTTAAGGGAGATGAAAAGATGCCAAATTCCAAGATCCACTTGATTGCTAATGAGAATAGTGGAGGTTTCCCAAGTGCTAAGAAAGGTGGGAATTATGGCTTTGAGGTAGTAGTAGCACAGAAGAGCGAAATGCGAGCTCCTAGTCTGGTTGCTAGATTGATGGGGCTAGAAACTATTCCGGCTTCAAAGCGTGATAAGTCCAAGAAATCTTTGCATTTGGATGGTTTTGGTGATGAGGTGAAGGAGTGTAAGAGTAATTGTGAGTTGGATAGGCAAGGTGTGGATTCAGAAATAGTAGTTATGAAGCATGATTCAAGGCCTGAGAAGCTTCAGAAGACCGGGACAGATGAGAGACGGGCGGTGACAAGGTTTGGAGCCGAAGCCTTGCAAATTAAGAACGTTTTGTCCAGAGCAAGAAAGTACCATCATCATCATCATCATCATCAACACAATCACCATCCAAAGCTCGCGTCTCAGTTGAAGAGCCCGAGAATTCCTTCAGCGAAGAGTGCTTCTCGAAGCTCTAGGTTGATAGGAGCAGCTACTAGAATTTTGGAACCTGGATTACAGTCTAGAAGCAGAGATAAAGGTTCTCTTCTCACATATCATCCTAAAACCAGCATTGTGACAAATTGTGAGGGACCTATTTCGGCAGATATGCAAAATCAATTTGATTATGATGGCAGCACAGCCAAGCCTTTGATGGGGCAGACTTCTTGCAAAAATTGTGGTAATTTAGTTGATGTTGGCGACTGTAAGCTGGATGCTCCTTTACCTGTTGTGTCAGATGTGTTTGCAACAACCTCGGTATCATCACAGAAGAATGGTAGGTCCTTTACTCCCTCTCATGAACAAGAAAGAGAAATAGTTCTTCTAAGAAGTCAAGAAAAGCCCATGTCTCTTGCTACTGAGAAAGAAGGAACAGATTTTTGTAACAAACACATCACCAAGAGAATGACGGTGCCTCTCAACGGTCCAGATATATGGAAGCCATCAAGCCAATCGATTAGTACTCGAGAGGGTGATGCATCTTCCTTTGCATTAAAGCACAAAGAACGAATGTTGAGCAGCGAAAGAGGCTCATTTGCATCTACAATGAGTAATACAGGAGTGAAAAGAGTGTCATCATCTACAAGCAATGTGAATGAGACTAAAGACTTTGTTGCTCTGAATAGAAGCCTAAGTGGTCAAGTGAGGACAAGGTCACCCACCAAAGTAGATAGTTCGAAATTTGACCTTGAGAAAAAACCAAGTTTTAGTCAGAACAAATCCTTGTCTGATGTAAGGACATTTGAGAGAAAAAGAAGAACCTCAAATGTCATGCAAGGTAAAAGTGCACCTCTTTGTTCAGCTGGAGTGAGTCAGAGAAATCTTCGATCCGATGCACTTGGCGGGAAACAGAAGAGCTTTGTTGGGTCCTCCTGGAATAGTTCTAACATCAAAAGTAAGCAATGCAGTAAGGAGAAAACAGTGAAGGTTAATGACAACAAAACCAATGAGGTGGTTTCGTTTACATTTAATTCCCCGTTGAAGCAAAAGATAGGGATAGATGCTGAGAAGGAAGAGATAAGCACCGATATCGAGAGAAAGACATGCTTCCAAACACCTTCATCCTTGCGAGTTGATGGTTTAAGTGCCTTTCTAGAACATAAGTTGAAAGAGATAACTTCTCAAGAAGATTATGAGTTGGCTACAGGTAATCCATCAAAAAAATCATCTGCAATGATTCTTCAGGAGCTGATATCTGCTCTAAGTTCGGAGCGCCTGATTTGCTGTAACGGTCATCTGTTTGATGAAAACACAGGGTTTCATAAAGAGCCAAGACAAGAAAGGATATTCGGAGCCTCTTGCAATGGTAATCATCACAGCCCTGGATCAGTTCTTGAAGCTTCCTTTTCTTCTAGTAGTTTGGATGAAAGCTCAGTTTCAGGGCACAGTTTTCACCCTTGCTCCATGAGTAACTCCTATGATCAGCTGGAACAATTGGAACATGATACTGAACTCACAGATTCTGCAACAACATCCTCAGACAAAGGGAGAGTAGTTTGTGAGATACTGATTGATCTTGTCAACCAAATTCCCGGGCCATTACAAAGCTTATATTCTTTTGGCCCAAGTTTGACTAGAAGCAAGCTCACTCATATGAAAGATGTTATCTTGAATGCTGAATTGGTTATTGGAATCGACGCTGCCTTTGGTCGGGATGAAGCCCCGGAACTTGTAATTCATCGGTTTCTCCTCGACGAACTGGACACCATGGCAAGTGATACTATTTGGAGAAATTTCAATCTCTTCGTGGGGTGCGCCGAGTCTAGACAGCCAAACAAACTTAAGGCATTCCTCTTTGATTGTGTTATAGACTATCTAGAATCAAATTGCTGCCCTTATCTTGAGTGTGGATTCAAGCTATGGTGGACCAAGTTGCATCAATGCTTGAAGGCCAAGGTGTTGGCTCAGGAGGTAAAGTCCGAGATCGAGAGATGGTCGAGCATGGCCGGGATGGAACATGATGAAATAATAGAATGGGAAATGAGCCATTCTTTGGGGAAATGGATAGACTTTGATATTGAAACATTTGAGGCTGGTGCTATGATAGATAGGTGCATATTTCAAAGCTTGTTGGATGAAATTGTTCAAGACCTTGTAGGTTACAAACACCAGCATGGTTCATCATGCAATATCTCTCCCTATCACTAG 2877 0.4234 MSDSSSTVKNSSSCLAIAEKKAQKPGGCSGIFFQLFEWKRKLAKKKLFSKKLLPPARAKRFKGDEKMPNSKIHLIANENSGGFPSAKKGGNYGFEVVVAQKSEMRAPSLVARLMGLETIPASKRDKSKKSLHLDGFGDEVKECKSNCELDRQGVDSEIVVMKHDSRPEKLQKTGTDERRAVTRFGAEALQIKNVLSRARKYHHHHHHHQHNHHPKLASQLKSPRIPSAKSASRSSRLIGAATRILEPGLQSRSRDKGSLLTYHPKTSIVTNCEGPISADMQNQFDYDGSTAKPLMGQTSCKNCGNLVDVGDCKLDAPLPVVSDVFATTSVSSQKNGRSFTPSHEQEREIVLLRSQEKPMSLATEKEGTDFCNKHITKRMTVPLNGPDIWKPSSQSISTREGDASSFALKHKERMLSSERGSFASTMSNTGVKRVSSSTSNVNETKDFVALNRSLSGQVRTRSPTKVDSSKFDLEKKPSFSQNKSLSDVRTFERKRRTSNVMQGKSAPLCSAGVSQRNLRSDALGGKQKSFVGSSWNSSNIKSKQCSKEKTVKVNDNKTNEVVSFTFNSPLKQKIGIDAEKEEISTDIERKTCFQTPSSLRVDGLSAFLEHKLKEITSQEDYELATGNPSKKSSAMILQELISALSSERLICCNGHLFDENTGFHKEPRQERIFGASCNGNHHSPGSVLEASFSSSSLDESSVSGHSFHPCSMSNSYDQLEQLEHDTELTDSATTSSDKGRVVCEILIDLVNQIPGPLQSLYSFGPSLTRSKLTHMKDVILNAELVIGIDAAFGRDEAPELVIHRFLLDELDTMASDTIWRNFNLFVGCAESRQPNKLKAFLFDCVIDYLESNCCPYLECGFKLWWTKLHQCLKAKVLAQEVKSEIERWSSMAGMEHDEIIEWEMSHSLGKWIDFDIETFEAGAMIDRCIFQSLLDEIVQDLVGYKHQHGSSCNISPYH 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271909g00010 958 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 14 940 - -
Stsc271909g00010 958 Pfam Domain of unknown function (DUF4378) 773 936 IPR025486 -
Stsc271909g00010 958 MobiDBLite consensus disorder prediction 458 478 - -
Stsc271909g00010 958 MobiDBLite consensus disorder prediction 199 236 - -
Stsc271909g00010 958 MobiDBLite consensus disorder prediction 199 217 - -
Stsc271909g00010 958 Pfam DUF761-associated sequence motif 100 125 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271909g00010 Stsc-Chr271909 51179 54779 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271909g00010 9 941 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 31.256 1.78e-84 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271909g00010 - - aprc:113861902 1074.69