Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271909g00004 | ATGCATAAACTGCTGGAAGCCCTGACTCCAACTCCAACTGGTTGGTCCAAAACAACCTCCCACTGCAACTGGACAGGCATTACCTGTAGTGGTATCAGCTGGAAGTGGGTCACCGCCATTGACCTCAGAGGATACTCACTCACCGGAATATTGCCCTCCAATCTCAACTCCCTCCATAATCTCATGGATCTTGACTTCGCTTATAATAATCTAACGGGGCCTCTTCCCTCACTCGCCAACCTCACCTTCCTCCAGTATGTTTACCTCGAATTCAACAACTTCACCTCCATTCCAGACGGCACCTTCCATGGTTTATTCAACTTGGAACGCCTCTCCATGGGAAACAACATCAACCTCGCGCCATGGACCTTTCCCGCTAATAATTTTAATTTCACTCCTGATTACTCTGATCGTCCTCTAGAGGTTATGTGGCTTGATGCCACGAACTTGGAGGGTAGCTTGCCGGATACGTTCCAGTTCTTTCCCAGACTGCGGTATCTTTCTCTCAATGACAACAACCTCACCGGGATCCTCCCCAACTCTCTAGCTCAAACTGCAGTTGAACAATTACTTCTTCAAAACCAGAAAGTTGGGTTTGAAGGGTCACTGCATGTACTTTCCACCATGACCCACTTGACAAAGATATACCTTCAAAATAACAAGTTCAGTGGTTCAATCCCAAACTTGTCAAATTCTCCAAATTTGGTAACACTCAGACTTGATAACAACTTCTTAACCGGTGTCGTTCCACCTTCTCTCGCCACTCTTCCCAACTTGGAGTGCCTTTATTTGAACAAAAACATGCTAAGGGCTCCAATACCTAACTTTGGCAGCCATATCAGAGATATCAGCTTATATCCAATCAACAGATTGTGTCCGGAGTCTGCTGGACTTTGCGATCAGATGGTCTTGCTTGACATTGCAGAAGCCTACGGTAATCCAGTAAAGTTAACCCATTCATGGAAATGGGACAACCCTAATTGTCAAAATTGGGACTTCATTGTGTGCCGAGGACAAGATAGGAAGGCGGTGGTTGTGAATTTGGAAAGGCAAGGCTTGATGGGGATGATCACACCTGAGTTTGCTAATTTAACTGATTTGAAGGCTTTGAATCTGAGTGGAAATAATTTGACAGGTTCAATACCTTCAAGCTTTGTAATGTTGTCCCAACTCGAGTCTCTGGATTTGTCCTATAACAACCTATCTGGAGAGATCCCTGAATTTCCTACCAGAGTGAAGTTGAATATTATTGGTAATCCTTTGCTTCAAAATTCCCAAGGACATTCAACATTTCCAATTGTTTGGGTAGCAGGTGCATTAGCAATAACAATCATTGGATTTGTAATGTTTATTGTTATTGTTTATAATCGAAAAAGTTCTCTTAGTATTGTACCACAAGGATTCTTCAAGAGATTAGCAAGAATGCATTCAGACCACAATGACGAGGATTTCATGAAAAGATACAGTTTTTTAGTACCGAAGCACTACAGTGATTCAGAGATTAAAAAAATGACAAAGTCATTTCGGCATAAATTAGGTCAAGGAGGTTTTGGTGTTGTGTACAAAGGAACTTTACCTAATGGTCGTCATGTGGCGATAAAAGTAATTAATGAATCAAAGAGAAGTAGTGGAGAAGAATTCATGAATGAAGTTGTTAGTATTAGTAGAACATCTCATATCAATATAGTTTCTTTCTTGGGATTTTGTTATGAAAAAAATAAAAGGGCACTTATCTATGAATTTATGCCGAATGGTTCACTAGATAAGTTCATCATCAAGAGAAAAGAATCTTCAAGTATTGATTGTAATTTGGATTTAAACACATTATACAAAATTACAATTGGCATTGCAAAAGGATTAGAATATCTACATCGAGGATGTAGTACAAGAATTGTTCATCTTGATATCAAACCTCAAAACATTCTTTTGGATGAGGATTTTTGTCCTAAAATTTCTGATTTTGGGCTAGCTAAATTATGCAAGAGAAAAGAGAGCACAATATCTCTATTGGGCGCTAGAGGAACCATCGGATATATTGCTCCAGAAATTATAACTCGAAGGTATGGTGGAGTTTCTCACAAATCTGATGTGTATAGTTATGGTATGCTAACTCTTGAAATGTTAGGAGAAAGAGATTGTGAATATAGAAAATCACATACCAGCGAAATCTTTTTTCCTGAAATGATTTATGAAAATCTTGTGCGAGATAATATCCATTCAGGTTATTCTTCAATCATTGTAGAAGAAGACGCTGAAATATTAAAGAAGATGACTATGGTGAGTCTATGGTGTATTCAAACAATTCCAAAAAATAGGCCATGTATTAGTAAGGTAATAGAAATGTTAGAAGGACCACTTGAATCAATGCCATTTCCTCCAAAGCCCACCTCGTATTCTCCTAACATTCTTGTACCTTAA | 2418 | 0.3912 | MHKLLEALTPTPTGWSKTTSHCNWTGITCSGISWKWVTAIDLRGYSLTGILPSNLNSLHNLMDLDFAYNNLTGPLPSLANLTFLQYVYLEFNNFTSIPDGTFHGLFNLERLSMGNNINLAPWTFPANNFNFTPDYSDRPLEVMWLDATNLEGSLPDTFQFFPRLRYLSLNDNNLTGILPNSLAQTAVEQLLLQNQKVGFEGSLHVLSTMTHLTKIYLQNNKFSGSIPNLSNSPNLVTLRLDNNFLTGVVPPSLATLPNLECLYLNKNMLRAPIPNFGSHIRDISLYPINRLCPESAGLCDQMVLLDIAEAYGNPVKLTHSWKWDNPNCQNWDFIVCRGQDRKAVVVNLERQGLMGMITPEFANLTDLKALNLSGNNLTGSIPSSFVMLSQLESLDLSYNNLSGEIPEFPTRVKLNIIGNPLLQNSQGHSTFPIVWVAGALAITIIGFVMFIVIVYNRKSSLSIVPQGFFKRLARMHSDHNDEDFMKRYSFLVPKHYSDSEIKKMTKSFRHKLGQGGFGVVYKGTLPNGRHVAIKVINESKRSSGEEFMNEVVSISRTSHINIVSFLGFCYEKNKRALIYEFMPNGSLDKFIIKRKESSSIDCNLDLNTLYKITIGIAKGLEYLHRGCSTRIVHLDIKPQNILLDEDFCPKISDFGLAKLCKRKESTISLLGARGTIGYIAPEIITRRYGGVSHKSDVYSYGMLTLEMLGERDCEYRKSHTSEIFFPEMIYENLVRDNIHSGYSSIIVEEDAEILKKMTMVSLWCIQTIPKNRPCISKVIEMLEGPLESMPFPPKPTSYSPNILVP | 805 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271909g00004 | 805 | Gene3D | Ribonuclease Inhibitor | 299 | 426 | IPR032675 | - | |
Stsc271909g00004 | 805 | SUPERFAMILY | Protein kinase-like (PK-like) | 488 | 782 | IPR011009 | - | |
Stsc271909g00004 | 805 | PANTHER | OSJNBA0070M12.3 PROTEIN | 1 | 786 | - | - | |
Stsc271909g00004 | 805 | Gene3D | Transferase(Phosphotransferase) domain 1 | 582 | 789 | - | - | |
Stsc271909g00004 | 805 | SUPERFAMILY | L domain-like | 15 | 424 | - | - | |
Stsc271909g00004 | 805 | ProSiteProfiles | Protein kinase domain profile. | 506 | 792 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271909g00004 | 805 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 631 | 643 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc271909g00004 | 805 | Pfam | Leucine rich repeat N-terminal domain | 304 | 336 | IPR013210 | - | |
Stsc271909g00004 | 805 | Pfam | Leucine rich repeat N-terminal domain | 10 | 30 | IPR013210 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 388 | 419 | IPR003591 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 209 | 232 | IPR003591 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 81 | 104 | IPR003591 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 256 | 279 | IPR003591 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 161 | 184 | IPR003591 | - | |
Stsc271909g00004 | 805 | SMART | LRR_typ_2 | 364 | 387 | IPR003591 | - | |
Stsc271909g00004 | 805 | Gene3D | Ribonuclease Inhibitor | 3 | 291 | IPR032675 | - | |
Stsc271909g00004 | 805 | Gene3D | Phosphorylase Kinase; domain 1 | 478 | 581 | - | - | |
Stsc271909g00004 | 805 | PRINTS | Leucine-rich repeat signature | 367 | 380 | - | - | |
Stsc271909g00004 | 805 | PRINTS | Leucine-rich repeat signature | 388 | 401 | - | - | |
Stsc271909g00004 | 805 | Pfam | Leucine rich repeat | 361 | 401 | IPR001611 | GO:0005515 | |
Stsc271909g00004 | 805 | FunFam | Leucine-rich repeat receptor-like kinase | 300 | 425 | - | - | |
Stsc271909g00004 | 805 | Pfam | Leucine Rich Repeat | 163 | 182 | IPR001611 | GO:0005515 | |
Stsc271909g00004 | 805 | ProSitePatterns | Protein kinases ATP-binding region signature. | 512 | 534 | IPR017441 | GO:0005524 | |
Stsc271909g00004 | 805 | FunFam | serine/threonine-protein kinase PBS1-like | 474 | 581 | - | - | |
Stsc271909g00004 | 805 | ProSiteProfiles | Leucine-rich repeat profile. | 390 | 412 | IPR001611 | GO:0005515 | |
Stsc271909g00004 | 805 | Pfam | Protein kinase domain | 510 | 780 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271909g00004 | 805 | FunFam | PR5-like receptor kinase | 582 | 793 | - | - | |
Stsc271909g00004 | 805 | SMART | serkin_6 | 506 | 782 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271909g00004 | Stsc-Chr271909 | 24986 | 27528 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271909g00004 | 494 | 805 | Receptor kinase-like Gene Family | AT5G38280 | 56.962 | 3.91e-118 | 370 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Stsc271909g00004 | Pkinase | 3.3e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271909g00004 | - | K00924 | csav:115712166 | 697.967 |