Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271907g00014 ATGGCAGCAGCACTTGTGGGTGGAGCTTTTCTATCTGCAGCACTTCAAGTGTTGTTTGATAGATTGGCTTCAAAGGAAATGCTTGATTTCATCAAAGGAAAGAGGCTCAGCGAAAATTTGGTGAAGAATTTGGAAGTCCAACTGTTATCTGTGAGTAAGGTTTTGAGTGATGCAGAGAAGAAACAGATTCATGATGCACAAGTCAAGAAATGGGTTAATGAGCTCAAAGATGCTGCTTTTGATGCTGATGATATCTTGGATGAGATTGCAACTGAAGCTGAAAAGGCTTCAAATTCAGGTACGGTTTCAAAGAAATTGTTCCTAAATTCGTTCAATTCTAATTATCGAGATATTGAGAATAGGCTTGAAGAGATAATAAAGAGGCTAGGGTTTATTGCTGATCAAAAGGATATTCTTGGTTTGAAAGAGGGGAATGTGGAGACAGTGTCACAAATTGTTCCAACAACATCATTGGTAGATGAAGTTTTTGGGAGGGAAATGGATAAGAGGGTAATAATGAAATTGTTGTTAGAAGAAGATGATTCGAGTGGTAGTAAGATTGGTGTGATTCCAATTGTGGGGATTGGGGGTGTTGGGAAGACCACACTTGCTCAGCTTGTGTACAATGATGATAAAGTGGATGAGCATTTTGGCCTTAAGGCATGGATCGATGTCTCGCAGCAATTCGATGTGTCTCATGTGACAAAGACGATTCTAGCCGTGACCGGTTCGTATGATTATGACCTTGATGACTTGAATCTACTCCAGGTCAAGCTGAAGGAGAAGCTATTGAAGAAGAGATTTCTAATTGTGTTAGATGGTGTTTGGAATGCTAGACCTGATAGTTGGGAGCTCTTTTGTCGGCCGCTTCAAATTGGTGATCAGGGAAGCAAAATCATAGTCACAACCCGGCACGAAACTGTCGCGTTGAAGGTGGGAACCGTCGAGACTTACTTTCTGAAAGAGTTGGCTGATGAAGATTGCTTGAGGGTATTTGCAAAACATGCACTTCTGTCTCGTCATGCAATTTCGGATCAAAATCTTCATGTTCTTGGCAATGAAATTGCTAGGAAATGCAGAGGATTACCTTTAGCTGCAAAAGCTCTTGGTGGCCTTTTAAGATCATTTCCTTCTGTTGATGATTGGTACAAGATACTGAAGAGAGAAATATGGCAGTTTTCGGATGAAGAACTTGGCATTATTCCAGCTCTGAAATTGAGCTACTATTATCTTCCTTCACATTTGAAAAGGTGCTTTGCATATTGTTCTATGTTTCCCAAGGGATATATATATGATAAGGAGCAAATCATACTTTTGTGGATGGCAGAGAACTTCATTGAAACCTCAAATCAAGGTATGACAATGGAAGAACTTGGTGATCAATACTTCAGTGAATTGGTCTCCAGATCGTTCTTTCAGAAGTCGAGCTTTCACGGATCACAGTTCACGATGCATGATCTCATGAACGATCTAGCAAGAGACGTGTTCGGAGAATTTGTTTCTAAGTTGGAAGATGAGTACTCTCCACCTGTCATCGAAAAGACCAGGCACATATCCTTTCTAAGGGATAGCTATGATCTAGACTTGGTAGAGGATCTAAAAAAAGCGAAGCGGCTTCGCACCTTCTTATCATTGAATTTGTTATGGCCATTTGTGGCATCTACATGTCAGGAGGTGCCAGTTGATCATCTCACTGTGCTAACATGTTTGAGAGTGTTGTCTCTGAATGATTGTTATGAGATTAAAAGATTGTCAAAATCAATGGGCAATCTGATACATCTTCGCTATTTGGATGTCTCTCGCACTTCAATAACAAAGCTTCCTGAATCCGTCTGCACCTTGTATAACTTGCAGACACTGAAGGCAGCAAAATGTGCTTCCCTTAGGAAATTGCCGAAGAATCTGCATCGTCTTGTTAATTTGCGATACCTTGATACTAGGGGAACTCCATTGCAGCATATGCCAAAGAAGATCAGCAAATTGGTGAATCTTAAAGTGTTGAGCACATTTGTTGTGGGAAAAAATAAAGGATCAACAATTCAAGAGTTGAAAGAGATATCAAAACTTCATGGATCGCTCTCTATTAATAAGTTACAAAATGTTGCTGGTCCTGCAGATGCATTGAATGCTAAAATGGTTCATAAGGAATTCCTTGAAGAGCTGAAAATGAATTGGGATGGTACAACTGGTCTCAAAGATTCACAGCAAGAAATCAATCTGCTTAATAATCTAAGGCCACATGAAAATTTGAAGAAACTCTCTGTCCATTGTTACCGTGGAACAAGATTTCCAAATTGGTTGGGGAATCATTCTTTTCATAGCTTGACCTCTATGTCACTAAATTGCTGCAGGTACTGTAATTCTTTGCCACCTCTCGGCCAGCTTCCTTCCCTTAAAGTTCTTGAAATCTTGCAGTTTGATGAACTAGTGACAATTGGCAATGAGTTTTATGGATCCTCTGCATCGAAGCCATTTCCATCTTTGGAGATACTGAAATTCATTTGTCTACCGGCGTGGACAAACTGGCATTCTCTTCGAGACGAATCTTTCCCTTGCCTTAATGAGCTCCACATAGAAAATTGTCCATCATTGAGCAACGATTTGCCTCGCCAGCTACCGAGTTTGGTGAAACTGGTCATCAGAGACTGCCTAAAGCTTGCTTCTTCACTCCCCAAGGCTCCAGCTATGCAGGAAATGGAGATAACTAATTCTGACAAGGTAGTTTTAAAGGAAATACCAAGCAATCTGAAATCATTCAAAGTGAAAGGCTGTGAGATCATGCAATCTACATTTAAAGCCTTAGAGCACACAGGATCTCACCTTCAAAGCTTGGAAATCTCTAGTTGTTCACTCGACATATTGATTCCGCAATCGAAACTGCCAAGTTCACTGAGGAAACTCATTGTTCAAGACTGTGAGAAACTTTTGATTATAACTGAGCAACCCAACAAAACAATTGAATGGATATCAATATCAGAAAGCTGTGATTACCTCGGATCCTTCCCAATGTCCATGTTTCCCAATCTCACTTACCTCTTTCTTAAAGGCTGCAAATCTCTAACATCCTTAGTGCTGTCACAAAACTGTCTCCAATTCCCAGGTCTATACTCTCTTAGTATAGTCAACTGTCCTGCTTTTGTATGCTGTGGAGATTTTCTAGCTCCCAACCTGACTCACCTTTCAGTTTCTGGTTGCGAGAGCTTGATGTCATTGCCAGAGAACATGGACCTTCTCATGCCATCTTTACAAACACTTACAATATACAAATGTCCCAAAATTGAGTACTTTCCCGGAGGCTGTCTACCTTCCGGTCTAGCCGAACTGCAAATAGGAAACTGCGAGAAACTCATTGCGAACCGGTCTGACTGGAACTTGCAAAGGGTGGAATCTCTGGAAGTTCTTAGCATAATTGGAAGATGTGAGAATGTGGAAAGTTTCCCTGATGATGATCTTTTACCTGCCAATGTAGCAGAACTGTTCATTGATGGATTTGTGCATCTCAAAAGATTGAACTACAAAGGCCTTGAAAATGTTGATTCTCTCTTAGAATTGAACATCAGCATGTGCCCTCAGATTCAGTCATTGCCAGAAGAAGGGTTGCCTGATACACTTAAATTTCTCAGCATTTGGGGTTGCCCTTTGCTAAGGGAACGTTGCAAGAAGGACATAGGGGAAGATTGGCCTAAGATTTCTCACATACCCTTTATAACCATTGATGAATAA 3723 0.4067 MAAALVGGAFLSAALQVLFDRLASKEMLDFIKGKRLSENLVKNLEVQLLSVSKVLSDAEKKQIHDAQVKKWVNELKDAAFDADDILDEIATEAEKASNSGTVSKKLFLNSFNSNYRDIENRLEEIIKRLGFIADQKDILGLKEGNVETVSQIVPTTSLVDEVFGREMDKRVIMKLLLEEDDSSGSKIGVIPIVGIGGVGKTTLAQLVYNDDKVDEHFGLKAWIDVSQQFDVSHVTKTILAVTGSYDYDLDDLNLLQVKLKEKLLKKRFLIVLDGVWNARPDSWELFCRPLQIGDQGSKIIVTTRHETVALKVGTVETYFLKELADEDCLRVFAKHALLSRHAISDQNLHVLGNEIARKCRGLPLAAKALGGLLRSFPSVDDWYKILKREIWQFSDEELGIIPALKLSYYYLPSHLKRCFAYCSMFPKGYIYDKEQIILLWMAENFIETSNQGMTMEELGDQYFSELVSRSFFQKSSFHGSQFTMHDLMNDLARDVFGEFVSKLEDEYSPPVIEKTRHISFLRDSYDLDLVEDLKKAKRLRTFLSLNLLWPFVASTCQEVPVDHLTVLTCLRVLSLNDCYEIKRLSKSMGNLIHLRYLDVSRTSITKLPESVCTLYNLQTLKAAKCASLRKLPKNLHRLVNLRYLDTRGTPLQHMPKKISKLVNLKVLSTFVVGKNKGSTIQELKEISKLHGSLSINKLQNVAGPADALNAKMVHKEFLEELKMNWDGTTGLKDSQQEINLLNNLRPHENLKKLSVHCYRGTRFPNWLGNHSFHSLTSMSLNCCRYCNSLPPLGQLPSLKVLEILQFDELVTIGNEFYGSSASKPFPSLEILKFICLPAWTNWHSLRDESFPCLNELHIENCPSLSNDLPRQLPSLVKLVIRDCLKLASSLPKAPAMQEMEITNSDKVVLKEIPSNLKSFKVKGCEIMQSTFKALEHTGSHLQSLEISSCSLDILIPQSKLPSSLRKLIVQDCEKLLIITEQPNKTIEWISISESCDYLGSFPMSMFPNLTYLFLKGCKSLTSLVLSQNCLQFPGLYSLSIVNCPAFVCCGDFLAPNLTHLSVSGCESLMSLPENMDLLMPSLQTLTIYKCPKIEYFPGGCLPSGLAELQIGNCEKLIANRSDWNLQRVESLEVLSIIGRCENVESFPDDDLLPANVAELFIDGFVHLKRLNYKGLENVDSLLELNISMCPQIQSLPEEGLPDTLKFLSIWGCPLLRERCKKDIGEDWPKISHIPFITIDE 1240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271907g00014 1240 Gene3D - 322 406 IPR042197 -
Stsc271907g00014 1240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 422 IPR027417 -
Stsc271907g00014 1240 Coils Coil 41 61 - -
Stsc271907g00014 1240 Gene3D - 145 317 IPR027417 -
Stsc271907g00014 1240 Gene3D - 14 125 - -
Stsc271907g00014 1240 Coils Coil 108 128 - -
Stsc271907g00014 1240 Pfam NB-ARC domain 169 387 IPR002182 GO:0043531
Stsc271907g00014 1240 FunFam Probable disease resistance protein At1g63360 408 494 - -
Stsc271907g00014 1240 Gene3D - 407 495 IPR036388 -
Stsc271907g00014 1240 PRINTS Disease resistance protein signature 262 276 - -
Stsc271907g00014 1240 PRINTS Disease resistance protein signature 1004 1020 - -
Stsc271907g00014 1240 PRINTS Disease resistance protein signature 359 373 - -
Stsc271907g00014 1240 PRINTS Disease resistance protein signature 189 204 - -
Stsc271907g00014 1240 PANTHER DISEASE RESISTANCE PROTEIN RP 43 863 IPR044974 GO:0006952
Stsc271907g00014 1240 Gene3D Ribonuclease Inhibitor 984 1223 IPR032675 -
Stsc271907g00014 1240 SUPERFAMILY L domain-like 480 977 - -
Stsc271907g00014 1240 Pfam Rx N-terminal domain 10 100 IPR041118 -
Stsc271907g00014 1240 SUPERFAMILY L domain-like 994 1231 - -
Stsc271907g00014 1240 Gene3D Ribonuclease Inhibitor 528 937 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271907g00014 Stsc-Chr271907 84206 88092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271907g00014 187 812 WRKY Transcription Factor Family AT5G45050 22.546 1.06e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271907g00014 - - aip:107627475 2210.26