Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271907g00006 ATGGTGTCTAAACTTGAGAGTGTATCTAAGTCAATGATGGTAAAGCCATCGTCTCCAACCCCTAATCACCTTAGACACTTCAAAATCTCCCTCCTTGATGAGATGGCTCCTTCAGTCTACATCCCAATTATTTTGTTCTACTCTGCCACTGATATAAGTAGTAGTCCCTTCGGTACCCATGATTTCAAAGCCATGTCCAACAAGTTAAAGGCTTCCTTATCCAAAGTTCTCACTCTCTATTACCCGTTTTGTGGAAGATTCAAATGCACTTCATCATCATCCTCAATCTCCGTTGATTGCAATGATGAAGGTGTACCTTACATTGAGTCTAAATTCTCCAAGAACCTTTCAGATATTCTCAATAGACCTCAATCTGAGATGCAAGAGCTTCTGCCATTCCACCCATATAACCACGATGTTCCGAATATCTCGGAACATTGTGACAAACACATGGTGAGCATGGCAGTTAAAGTGAGTGAATTCAAGTGTGGAGGTGTTGCACTTGGTGTGTGCCTGTCACACAAGATAGCAGATGGTGAAACAACAGCATCATTCCTGAATGCTTGGGCTAAAACTGCAAGGGATCTTTTCAATGAAGTAGAACCGCCACAAATGGATGCATCATTGATTTTCCCATCAAGGGGAATAGAATGGGCATTGAATAGTCTCATGGTTGGGGAAGGAGGTGGTAATGAAAAACTAGTGACCAAGTGTTTCTTGTTTAGTGCAATGGATTTGTCCAGATTGAGAGTTAGATTTGGCAGTTTCAATGCCACTCGTGTTGAAGCTGTCACCACCCTCATATGGAAATCAGCTATACAAGCGGCAAAAGCAAGTTCCGGTGATGATGAATCTAAGCGAACCCTCAAAGCTTCTCTCGTGTGCCACGCCTTGAACATTCGGAATAGAATGGTGCCACCATTGCCAAAAAACATGTTTGGCAATCTCTGGCTATTTGCTTTTTCTGATTTAGTGGAAACAGATGGAACGTACGGAACTGAAGAGCTGCATGATTTGGTGGAGATCGTTAGGAATGGGATCAGAGAAGCTGCTGCAAATTATTCGAGTTTGATTAACCAAGGTGATGACGGTGTAAATGAGCTTGTTGAATTCTCGAAAGAAGCAAAGTTAATGGTGACGGAGAACATTATTGCATGTTATGGATTTAGTAGTTGGATAAGATTCGGTTTCTATGATGTTGATTTTGGATGGGGGAGACCAACTAAAGTGAAAAATATTAATCTGCCTATGAAGAACATCATATATTTAATTCCTACAAGAAATGGAGATGGAATAGAAACTTGGGTAACCATGACTGAGCTTGATATGGATGAGTTTCAGCGCAACCCTGGCCTTCTCCAATTCGCTTCTCTAGAATCTTAA 1383 0.4136 MVSKLESVSKSMMVKPSSPTPNHLRHFKISLLDEMAPSVYIPIILFYSATDISSSPFGTHDFKAMSNKLKASLSKVLTLYYPFCGRFKCTSSSSSISVDCNDEGVPYIESKFSKNLSDILNRPQSEMQELLPFHPYNHDVPNISEHCDKHMVSMAVKVSEFKCGGVALGVCLSHKIADGETTASFLNAWAKTARDLFNEVEPPQMDASLIFPSRGIEWALNSLMVGEGGGNEKLVTKCFLFSAMDLSRLRVRFGSFNATRVEAVTTLIWKSAIQAAKASSGDDESKRTLKASLVCHALNIRNRMVPPLPKNMFGNLWLFAFSDLVETDGTYGTEELHDLVEIVRNGIREAAANYSSLINQGDDGVNELVEFSKEAKLMVTENIIACYGFSSWIRFGFYDVDFGWGRPTKVKNINLPMKNIIYLIPTRNGDGIETWVTMTELDMDEFQRNPGLLQFASLES 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271907g00006 460 PANTHER F21J9.9 10 457 - -
Stsc271907g00006 460 Gene3D - 4 216 IPR023213 -
Stsc271907g00006 460 Gene3D - 231 451 IPR023213 -
Stsc271907g00006 460 Pfam Transferase family 9 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271907g00006 Stsc-Chr271907 55721 58554 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271907g00006 7 431 Monolignol Biosynthesis Gene Families AT5G48930 25.280 1.08e-33 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271907g00006 - K13065 gmx:100792323 405.216