Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271907g00001 ATGGAGTCTAAACTTGAGAGTGTATCTAAGGCAATGGTTAAGCCATTGTCTCCAACCCCTAATCACCTTAGACACTTCAAGATCTCCCTCCTTGATGAGATGGCTCCTTCAGTCTATATCCCAATTATTTTGTTTTACTCAGCCACCGATATGAGTAGTGCCTTTGGAACCCATGATTTCAAAGCCATGTCCAACAAGTTAAAGGCTTCTTTATCCAAAGTTCTCACTCTCTATTACCCGTTTTGTGGAAGATTCAAATGCACTCCATCATCATCCTCAATCTCCATTGATTGCAATGATGAAGGTGTACCTTACATTGAGTCTAAATTCTCCAAGAACCTTTCAGATATTCTCAATGGACCTCAGTCTGAAATGCAAGAGCTTCTGCCATTCTACCCATATAACGAACATTGTGACAAACAGGAGAGCATGGCGGTTAAACTCAGTGAATTCCAGTGTGGGGGTGTTGCACTTGGTGTGTGCCTGTCACACAAGATAGCAGATGGTGAAACAACAGCATCATTCCTGAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTAAACGAAGTAGAACCGCCACAAATGGATGCATCACTGATTTTCCCATCAAGGGGAATAGAATGGGCATTGAATAGTCTCAAGGTTATTGGTGGTGGAGTTGGTAATAATGAAAAACTAGTGACCAGGTGTTTCTTGTTTAATGCCATGGATCTGTCCAGATTGAGAGTTAGATTTGGCAGTTTCAATGCCACTCGTGTTGAAGCTGTCACTACCCTCATATGGAAATCAGCTATACAAGCGGCAAAAGCAAGTTCCGGTGATGATGAATCTAAGCAAACCTTCAAAGCTTCTGTCGTGAGCCATGCCTTGAACATTCGCAATAAAATGGTGCCACCATTGCCAAAAAACTTGTTTGGCAATCTCTGGCTGTCCTCTATTACTGATTTACTGGAAACAGATGGAACGTACGGATCGGAAGAACTGCATGATTTGGTGGAGATCGTTAGGAATGGGATCAGAGAAGCTGCTGCAAATTATTCGGGTTTGCTTCTTAACCAAGGTGACGGCAGTTTAGATGAGCTTGTTGAATTCTCGAAAGAAGCAAAGTTAATGGTGACGGAGAACGTTTTTGCATGTTATGGATTTAGTAGTTGGATAAGATTGGGTTTCTATGAAGTTGATTTTGGATGGGGAAACCATTAA 1203 0.419 MESKLESVSKAMVKPLSPTPNHLRHFKISLLDEMAPSVYIPIILFYSATDMSSAFGTHDFKAMSNKLKASLSKVLTLYYPFCGRFKCTPSSSSISIDCNDEGVPYIESKFSKNLSDILNGPQSEMQELLPFYPYNEHCDKQESMAVKLSEFQCGGVALGVCLSHKIADGETTASFLNAWAKTAKGLLNEVEPPQMDASLIFPSRGIEWALNSLKVIGGGVGNNEKLVTRCFLFNAMDLSRLRVRFGSFNATRVEAVTTLIWKSAIQAAKASSGDDESKQTFKASVVSHALNIRNKMVPPLPKNLFGNLWLSSITDLLETDGTYGSEELHDLVEIVRNGIREAAANYSGLLLNQGDGSLDELVEFSKEAKLMVTENVFACYGFSSWIRLGFYEVDFGWGNH 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271907g00001 400 Gene3D - 2 206 IPR023213 -
Stsc271907g00001 400 PANTHER F21J9.9 7 399 - -
Stsc271907g00001 400 Pfam Transferase family 4 399 - -
Stsc271907g00001 400 Gene3D - 223 400 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271907g00001 Stsc-Chr271907 7638 9660 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271907g00001 4 399 Monolignol Biosynthesis Gene Families AT5G48930 25.837 2.02e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271907g00001 - K13065 gmx:100792323 345.51