Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271906g00012 ATGCTGAAATTCAAGTTTGTTCACACTGTTCTACTACTTTTGATTTTCTGTGCGAAACACACCAAAGCAAGAAACAACATAGAAGAATCCAAAAACACATACATAGTTCACATGGACAAATCCACCATGCCAGCAAGTTTCAGTGATCACCACAATTGGTATGAATCATCACTGCAATCAGTCTCAGAAACAGCAGAGGTGCTATACACCTACAAGCATGTAGTCCATGGATTCTCAACAAGGCTAACTAACCAAGAAGCCGACGCGCTCTCAGAACAACCGGGAATTCTTTCCATCATACCGGATCGCAAATACGAGCTTCACACAACAAGAACACCTTACTTCCTTGGATTGGAAGTAACTCTTGCAAGTTTGGACAGATTTAGCACCAATTTACTTGCTTCTGTGAAAGAGAGTGAGGTAATTATTGGAGTATTAGACAGTGGTATATGGCCTGAGCATGAGAGCTTGGATGACACTAGATTTGGCCCAATTCCAAATAGATGGAAAGGTGAATGTGAATCTGGAAAGAACTTCAATTCATCACATTGTAACAGGAAGCTTATTGGTGCAAGGTTCTTCTACAAAGGGCATGAAGGAGTTACTGGTCCTATTAATGAAGAGAAGGAATCAAAGTCACCAAGGGATGATCAAGGCCATGGAACTCACACCTTAACTACAGCAGCAGGTTCCTTAGTCTCCGGTGCGAGCCTCTTCGGCTTAGCTCCAGGGACAGCCAGAGGTATGTCTCCACAAGCTCGTGTAGCATCTTACAAGGTATGCTGGCATCAAGGTTGTTACTCCTCCGACGTAGCCGCCGCCATCGACAAGGCCATAGAAGATGGCGTGGATATCCTCTCCATGTCTCTTGGCTCCGATCTAGACGAATACTACAAAGATCTCACTGCAATTGGTGCTTTCATAGCTAACTCCCATGGAATTCTTGTTTCCATTTCGGCCGGGAATAGCGGCCCGGTTCCAGGACAAATATCTAATGTAGCACCATGGATGTTAACCGTCGGAGCCGGTACTTTAGACCGCGATTTCCCGGCCTATGTAACCCTCGGAAACGGGAATACATACACCGGATCATCACTCTATAGGGGAGTGTCCTTACTCGACACTCCCCTGTCTCTGGTTTATGCCGGTAACGTTAGCAATAACTCATCATCTAACTGTGAAATGAATACACTGATCCCGGCTCGAGTGGCCGGGAAGATTGTGCTATGCAAGAGAGGAGGCAATGGAAGAGTTGCGAAGGGATTAGAAGTGAAGAGAGCTGGTGGGATTGGAATGCTGTTAGGGAACAATAAACAGCATGGAGAGGAGTTAGTTGCAGATGCACACGTTCTTCCTGCAGCATCGTTAGGACAGAAAGCGAGTGATGAAATAAGAGACTATATTTTGTCTTATCCAAATGCCACTGCTACGGTTTCTTTTTTAGGAACTCATTTACAGGCTCAGCCTTCTCCGGTGGTGGCCGCCTTCAGCTCCAGAGGACCGAATCCTCTGACGCCGAAGGTGCTCAAACCGGACCTGATCGGACCGGGGGTTAACATCCTGGCAGGATGGACAGGAGCAAATGGACCATCTGGTTTGGAAGAAGACAGTAGGCGCACTAGCTTCAACATTATGTCCGGTACATCAATGTCATGCCCTCACATAAGTGGTTTAGCAGCTATCCTTAAGGCAGCACACCCTGAATGGAGCCCTGCTGCAATAAGGTCTGCCCTTATGACAACATCATACACAACATACTCAAATGGGAACCCTATAATTGACATTGCCACACAAAAACCAGCTTCACCCTTTGACTTTGGTTCTGGACACGTGGATCCACTACAGGCACTTGATCCTGGCCTTGTCTATGATGCAGATTTACATGACTACCTCAACTTCCTCTGTGCCTTAAACTACAATCAATCTCAAATTAAGGTTGTTGCTAGAAGAGACTTTACTTGTGACCCAAGAAAGATTTATAGGGTTGAAGATCTTAACTACCCTTCTTTTGCTGTTCCTTTTGATTCTAAAATTGCATCCACCAGTGTTCAATATACAAGGATATTTACAAATGTGGGTACCCCAGGAATATATAAAGCTTCAGTGTCATCCCAACCAAATTCATTAGTAAAAGTTATGGTTGAACCAGAAACACTTAGTTTTACCGAATTGTTTGAGAAGAAAAACTACACCGTGACATTCACATCTTTTGATTCAGTTCCTTCCGGCACAAAAAGCTTTGCTTATCTGAAATGGTCAGATGGAAAGCATAAGGTTGTTAGTCCAATTGCATTCAGCTGGTTGGATTAG 2310 0.4459 MLKFKFVHTVLLLLIFCAKHTKARNNIEESKNTYIVHMDKSTMPASFSDHHNWYESSLQSVSETAEVLYTYKHVVHGFSTRLTNQEADALSEQPGILSIIPDRKYELHTTRTPYFLGLEVTLASLDRFSTNLLASVKESEVIIGVLDSGIWPEHESLDDTRFGPIPNRWKGECESGKNFNSSHCNRKLIGARFFYKGHEGVTGPINEEKESKSPRDDQGHGTHTLTTAAGSLVSGASLFGLAPGTARGMSPQARVASYKVCWHQGCYSSDVAAAIDKAIEDGVDILSMSLGSDLDEYYKDLTAIGAFIANSHGILVSISAGNSGPVPGQISNVAPWMLTVGAGTLDRDFPAYVTLGNGNTYTGSSLYRGVSLLDTPLSLVYAGNVSNNSSSNCEMNTLIPARVAGKIVLCKRGGNGRVAKGLEVKRAGGIGMLLGNNKQHGEELVADAHVLPAASLGQKASDEIRDYILSYPNATATVSFLGTHLQAQPSPVVAAFSSRGPNPLTPKVLKPDLIGPGVNILAGWTGANGPSGLEEDSRRTSFNIMSGTSMSCPHISGLAAILKAAHPEWSPAAIRSALMTTSYTTYSNGNPIIDIATQKPASPFDFGSGHVDPLQALDPGLVYDADLHDYLNFLCALNYNQSQIKVVARRDFTCDPRKIYRVEDLNYPSFAVPFDSKIASTSVQYTRIFTNVGTPGIYKASVSSQPNSLVKVMVEPETLSFTELFEKKNYTVTFTSFDSVPSGTKSFAYLKWSDGKHKVVSPIAFSWLD 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271906g00012 769 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 108 IPR037045 -
Stsc271906g00012 769 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Stsc271906g00012 769 PRINTS Subtilisin serine protease family (S8) signature 546 562 IPR015500 -
Stsc271906g00012 769 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc271906g00012 769 MobiDBLite consensus disorder prediction 202 219 - -
Stsc271906g00012 769 SUPERFAMILY PA domain 396 442 IPR046450 -
Stsc271906g00012 769 Gene3D - 634 767 - -
Stsc271906g00012 769 Pfam PA domain 379 463 IPR003137 -
Stsc271906g00012 769 FunFam subtilisin-like protease SBT1.5 346 485 - -
Stsc271906g00012 769 ProSiteProfiles Serine proteases, subtilase domain profile. 113 617 - -
Stsc271906g00012 769 Pfam Subtilase family 139 588 IPR000209 GO:0006508|GO:0008236
Stsc271906g00012 769 Pfam Fibronectin type-III domain 664 764 IPR041469 -
Stsc271906g00012 769 FunFam Subtilisin-like protease SBT1.5 140 356 - -
Stsc271906g00012 769 SUPERFAMILY Protease propeptides/inhibitors 32 105 - -
Stsc271906g00012 769 Gene3D Peptidase S8/S53 domain 141 630 IPR036852 GO:0004252|GO:0006508
Stsc271906g00012 769 MobiDBLite consensus disorder prediction 201 225 - -
Stsc271906g00012 769 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Stsc271906g00012 769 CDD PA_subtilisin_like 352 478 - -
Stsc271906g00012 769 CDD Peptidases_S8_3 105 583 IPR034197 -
Stsc271906g00012 769 ProSitePatterns Serine proteases, subtilase family, serine active site. 547 557 IPR023828 -
Stsc271906g00012 769 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 764 IPR045051 -
Stsc271906g00012 769 FunFam Subtilisin-like protease SBT1.9 23 108 - -
Stsc271906g00012 769 SUPERFAMILY Subtilisin-like 108 621 IPR036852 GO:0004252|GO:0006508
Stsc271906g00012 769 Gene3D - 346 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271906g00012 Stsc-Chr271906 95909 99820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271906g00012 10 767 Subtilisin-like Serine Gene Family AT5G67360 60.526 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271906g00012 - - gmx:100793808 1040.41