Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271906g00010 ATGGCTCCACAAGCTCGTGTGGCGGCTTACAAGGTATGCTGGCTTGGTGGATGCTTCTCTTCCGACATAGCCGCCGGAATTGATAAGGCCATAGAAGATGGTGTCAATGTCCTATCCATGTCTATTGGGGGAACTTCAATGGACTACTATAGAGATATCATTGCTATTGGTGCTTTCACAGCCACATCCCATGGAATTCTTGTTTCCACTTCAGCAGGTAATGGAGGGCCTAGTCCTGGAAGCTTGTCTAATGTAGCACCATGGATAACCACCGTGGGAGCCGGTACCATAGACCGCGATTTCCCGGCCTATATCAATCTTGGAAACGGGAAGACATACACTGGGGCTTCACTTTACAGTGGCAAATCTTTATCTGATTCTCCAATACCACTTGTTTATGCTGGTAATGTAAGCAATTCATCGGTGGGATACCTTTGCATCCCAGAGAGCTTGATTCCTTCAAAAGTTGCTGGCAAAATCGTGATATGCGAAAGAGGAGGAACTCCGAGGGTGGAAAAGGGTCTAGTTGTGAAGAAAGCTGGAGGCCTTGGGATGATCTTGACAAACAGTGAAGAATATGGTGAAGAGCTTGTTGCTGACCCCCATCTCCTCCCTGCAGCATCATTAGGCCAAAAATCCAGTGAGGCTGTAAAAAGCTATGCTTTCTCCTCTCCAAATCCCACAGCTACAATTACTTTTGTAGGCACTCAATTGCGAGTTCAACCGTCTCCAGTGGTGGCGGCGTTCAGCTCTAGAGGGCCAAATTTTCTCACACCAAAGATACTCAAACCAGACCTTATAGCTCCCGGAGTTAACATCCTTGCTGGGTGGACTGGAGCAGTGGGACCAACCGGTTTGACAGTTGATACTAGGCATGTGAACTTTAACATAATTTCAGGAACTTCCATGTCATGCCCTCATATAAGCGGTTTAGCTGCTATCGTCAAGGGAGCGCACCCGGAATGGAGCCCGGCCGCCATAAGGTCTGCACTCATGACCACAGCCTATAGAACATACAAAACTGGGAAAACAATTGAAGATATTGCTACTGGACAACCAGCAACACCCTTTGATTATGGTGCTGGACATGTGGATCCAGTGGCAGCTCTTGATCCTGGTCTTGTCTATGATGCAAACGTAGATGACTACCTTAGCTTCTTCTGTGCCTTGAATTACACTCAATTCCAAATTAAGCTCGCGGCGAGAAGAGACTTTACTTGTGATTCAAGGAAGAACTACAGGGTGGAAGACTTCAACTACCCCTCTTTCGCCGTTCCCTTGGAAACAGCTTCAGGAATAGGAGGAGGTTCCAATGCACCCACCTCCGTCCAATACAAAAGAATTCTAACTAATGTGGGGACTGGAGGAACATATAAAGCTTCAGTGTCATCCCTTTCTCCGTCGGTCAAAATCGTGGTTGAACCGGAGACACTTAGCTTCACCGAACTGTATGAGAAGAAGAGCTACACTGTGACATTCACATCTCCTTCGATGCCTTCCGGCACAAATAGCTTTGCTTACCTGGAATGGTCAGATGGAAACCATAAGGTTGTTAGTCCAATAGCGATCAGCTGGATATGA 1581 0.47 MAPQARVAAYKVCWLGGCFSSDIAAGIDKAIEDGVNVLSMSIGGTSMDYYRDIIAIGAFTATSHGILVSTSAGNGGPSPGSLSNVAPWITTVGAGTIDRDFPAYINLGNGKTYTGASLYSGKSLSDSPIPLVYAGNVSNSSVGYLCIPESLIPSKVAGKIVICERGGTPRVEKGLVVKKAGGLGMILTNSEEYGEELVADPHLLPAASLGQKSSEAVKSYAFSSPNPTATITFVGTQLRVQPSPVVAAFSSRGPNFLTPKILKPDLIAPGVNILAGWTGAVGPTGLTVDTRHVNFNIISGTSMSCPHISGLAAIVKGAHPEWSPAAIRSALMTTAYRTYKTGKTIEDIATGQPATPFDYGAGHVDPVAALDPGLVYDANVDDYLSFFCALNYTQFQIKLAARRDFTCDSRKNYRVEDFNYPSFAVPLETASGIGGGSNAPTSVQYKRILTNVGTGGTYKASVSSLSPSVKIVVEPETLSFTELYEKKSYTVTFTSPSMPSGTNSFAYLEWSDGNHKVVSPIAISWI 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271906g00010 526 Gene3D Peptidase S8/S53 domain 1 383 IPR036852 GO:0004252|GO:0006508
Stsc271906g00010 526 Gene3D - 98 239 - -
Stsc271906g00010 526 ProSiteProfiles Serine proteases, subtilase domain profile. 1 370 - -
Stsc271906g00010 526 ProSitePatterns Serine proteases, subtilase family, serine active site. 300 310 IPR023828 -
Stsc271906g00010 526 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 522 IPR045051 -
Stsc271906g00010 526 Gene3D - 387 525 - -
Stsc271906g00010 526 Pfam PA domain 143 215 IPR003137 -
Stsc271906g00010 526 CDD PA_subtilisin_like 104 231 - -
Stsc271906g00010 526 SUPERFAMILY PA domain 129 192 IPR046450 -
Stsc271906g00010 526 Pfam Subtilase family 1 362 IPR000209 GO:0006508|GO:0008236
Stsc271906g00010 526 Pfam Fibronectin type-III domain 417 523 IPR041469 -
Stsc271906g00010 526 FunFam subtilisin-like protease SBT1.5 98 238 - -
Stsc271906g00010 526 SUPERFAMILY Subtilisin-like 1 374 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271906g00010 Stsc-Chr271906 81664 84000 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271906g00010 1 525 Subtilisin-like Serine Gene Family AT5G67360 64.829 0.0 691
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271906g00010 - - gmx:100793808 881.322