Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271905g00039 ATGGCCTCTATAGCCCTCTCCGCCACCACACTCCCCTCCCTCCGCCTCCGCCCTCTCTCTCGCAAACCCAATCCACTCCTTCATTCCCTTCCCACTCCCACCACTTCCACCACCTTCAAACCCCTCACTCTTAAACCACGCTCTCTCAATCTCATCACCTCCATTTCCAACCTTCCTTTCAAATCTAACCGCACACATTCTACCGTCGCTGCTGCAGCTTCCGTTACGCCAGCATCTCCGCCACCTCCACCTCCTCAGCCATGGCAAGGCGCCGCCATGAAGCCCTTACTCGCCTCCATAGCAATCGGCGTCCTCCTCTGGTACTCCCCCGTCCCCGCCGGTGTCTCTCGTAACGCATGGCAGCTCCTCGCGATCTTCCTCGGCACCATCGTCGGGATCATCACGCAGCCGCTACCTCTCGGTGCCGTCGCCATCCTCGGACTCGGCGTCTCCGTCCTCACCAAAACCCTCCCATTCGCGGCGGCCTTCTCAGGCTTCGGANNNNNNNNNNTCCCGTGGCTCATCTGCCTCGCCTTCTTCTTCGCCAAGGGATTCATCAAGACCGGCCTCGGTAACCGCGTCGCGTACCAGTTCGTCTCACTCTTCGGAAGCTCCTCCTTGGGGTTAGGGTACAGCTTGGTCTTCAGCGAAGCGCTTCTCGCGCCGGCGATCCCCTCGGTTTCGGCGCGCGCCGGCGGGATTTTCCTGCCACTCGTGAAGGCTCTCTGCGTTGCATGCGGAAGCAACGCTGGCGACGGGACGGAGAACCGCTTGGGATCGTGGCTCATGCTGACGTGTTTTCAGACGTCAGTGATCTCGTCGGCGATGTTCCTAACGGCGATGGCGGCGAACCCGTTATGTGCAACTCTGACTCAGAATGCGATTAACAAGACAATTGGGTGGGTGGATTGGGCTAAGGCTGGGATCGTTCCGGGCATGGTTTCGTTGGTGTTGGTGCCGTTGATTTTGTATGTTATCTACCCGCCGGGGCTGAAGAGTAGCCCCGACGCGCCGAAGCTTGCGAGGGAGAGGTTGCAGAAGATGGGACCTATGTCTTCGCATGAGAAGATCATGACATTGACACTGCTTCTTACGGTGGGACTTTGGGTTTTTGGAGGGGTTCTTGGTGTTGATGCTGTCACTGCTGCTATTCTTGGCTTATCTGTACTCCTTGTCACTGGGGTCGTAACATGGAAGGAGTGCCTGGCTGAGGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCCATGGCTGGATATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCTTGGCAACTATCTTTTGGAATCCTTGTTCTACTCTACTTCTACTCGCACTACTTCTTTGCAAGTGGAGCAGCTCATATTGGTGCCATGTTCACTGCTTTCTTGTCTGTCGCCACTGCTCTAGGAACTCCACCATTCTTTGGAGCCATGGTGCTTTCCTTCCTCTCCAACCTCATGGGCGGCCTTACTCATTATGGGATTGGATCAGCCCCTGTATTTTACGGTGCCAACTATGTTCCGCTCGCTAAATGGTGGGGCTACGGATTCCTCATCAGTATTGTCAACATTGTAATCTGGCTTGGACTCGGAGGAATTTGGTGGAAAGCCATTGGCTTGTGGTAA 1680 0.5482 MASIALSATTLPSLRLRPLSRKPNPLLHSLPTPTTSTTFKPLTLKPRSLNLITSISNLPFKSNRTHSTVAAAASVTPASPPPPPPQPWQGAAMKPLLASIAIGVLLWYSPVPAGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFGXXXXPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKALCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTQNAINKTIGWVDWAKAGIVPGMVSLVLVPLILYVIYPPGLKSSPDAPKLARERLQKMGPMSSHEKIMTLTLLLTVGLWVFGGVLGVDAVTAAILGLSVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFGAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNIVIWLGLGGIWWKAIGLW 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271905g00039 559 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 65 559 IPR030676 -
Stsc271905g00039 559 NCBIfam DASS family sodium-coupled anion symporter 110 553 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc271905g00039 559 Pfam Sodium:sulfate symporter transmembrane region 95 559 IPR001898 GO:0016020|GO:0022857|GO:0055085
Stsc271905g00039 559 MobiDBLite consensus disorder prediction 17 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271905g00039 Stsc-Chr271905 167312 169972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271905g00039 1 558 Antiporters AT5G12860 77.032 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271905g00039 - - gmx:100793559 845.884