Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271905g00030 ATGGATCATAATAATAACAATCATCACAAAATGTATGGTGGCATGGGACATACGACGATGAAGAAGTGCCACGATTTCATGCACATGACATTCTTCTGGGGAACGAAGTCCGAGGTTCTATTCGCCCAATGGCCTGGAGACAGCCATGTCATGTACGCACTCGCTCTGCTTCTTGTGTTCCTCATGTCCTTCCTCCTCGAGTGGCTCTCCCACACGCGCTTCATCAAACCCGGTTCGAAAAGCATTGTTACCGGTCTGGTTCAGACCTTCTTGTACCTCCTTAGAGTTGGTCTGGCTTACCTGGTTATGCTGGCGCTCATGTCCTTTAATGGTGGTGTGTTCTTGGTGGCGGTCTTCGCTCACGCTATTGGCTTCTTCTTCTTCCGTAGCAGGGCTTTTGCTAAAACGCGCCAAAATGATAATAACCACTTTGATGATCCTCCAATGTCTTGTTAA 456 0.4781 MDHNNNNHHKMYGGMGHTTMKKCHDFMHMTFFWGTKSEVLFAQWPGDSHVMYALALLLVFLMSFLLEWLSHTRFIKPGSKSIVTGLVQTFLYLLRVGLAYLVMLALMSFNGGVFLVAVFAHAIGFFFFRSRAFAKTRQNDNNHFDDPPMSC 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271905g00030 151 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 18 141 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc271905g00030 151 Pfam Ctr copper transporter family 86 128 IPR007274 GO:0005375|GO:0016020|GO:0035434
Stsc271905g00030 151 Pfam Ctr copper transporter family 29 73 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271905g00030 Stsc-Chr271905 126595 127329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271905g00030 30 151 Inorganic Solute Cotransporters AT5G59030 50.400 9.16e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271905g00030 K14686 - jre:108998461 158.688