Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271902g00028 ATGGAGTTTGCTCCTATCCTCTTGCTCATACTCTTTTTCATTATACCTCTCTTCCTCGTCACCAAACTTCTCAAATCAAAGAAGCCTAAGCTACCACCAGGTCCTAAACCATGGCCTATAGTTGGTAACCTCCCTGAAATGCTTGCTAACAAACCCACATTCAGATGGATTCAAAGCATCATGAATGATCTTGACACCGAAATCGCATGCATCCGTCTAGGTAGCATCCATGTGGTCCTGGTGGCGAGTCCTTCCATTGCACGTGAATTTCTAATGAAACAAGATGCGATTTTCGCATCAAGGCCGTTGAATTGGTCGAGTAAGTATGTCTCGTCGGGATACTTAACCACGACTATAACACCCTATGGAGAACAATGGAAGAAGATGAAGAGAGTCATGGTTGAGGAACTGATTTCGCCGAAAAGGCATCAATGGCAGCATGACAAAAGGGCGGAAGAAGCCGACAACCTTGTCCGTTATGTGTATAACCAAATCAAGAATGGTAGTGGCCTTGTGGATTTGAGGCGAGTAACGAAACACTATGTTGGAAATGTGATGAGGAGGTTGCTCTTCAATAAGAGGTACTTTGGTAATGGTAGTGAAGATGGCGGTCCTGGTGGTGAGGAATTGGAGTATGTTGATGCACTCTTCACCGCGATAAGGCACATTTATGCATTTTCTGTTTCTGATTTTCTTCCATGGTTGAGGTGGCTTGATTTTGAAGGTCATAAGAAAATATTGAAGGAAGCTACTGATATCATAAGGAAGTACCATGATCCCATCATTGAAGAAAGGTTTCATGAATGGAGGAACGGGACAAGGACACATCAAGAGGATTGGCTTGATGTTCTTATCTCTTTGAAAGATGCCAATAACAATGCATTTTTGACTCCGGAGGAAATCAAAAGTCAAATTATGGAAATTACAGTTGGAGCAATAGATAATCCATACAATAACGTTGAATGGATACTTTCTGAAATGTTAAATCAACCAAAAATACTCCAAAAGGCTATTGAGGAATTGGACAATGTGGTAGGAAAAGAAAGATTAGTGCAAGAATCAGATATTCCAAAGCTCAATTATGTGAAGGCATGTATAAGAGAAGGTTTTCGTCTTCATCCAATCGCAGACTTCAATGTTCCTCACGTCTCAATGGAGGATACAATTGTTGCCAATTATTTCATCCCAAAAGGTAGCCACATTCTTATTAGGAGGCAAGGTATTGGCCAAAATCCACGTGTTTGGGAAGAACCATTGAAGTTCAAACCTGAAAGACATTTGAAAAAGGATGTGAGTTTGGCTGAGCCAAATTTAGAGTTGTTCACATTCGGCACTGGAAGAAGATATTGCCCTGCAGTGACACTTGGGTCTACAATCACTATTATGCTCTTTGCAAGGTTGGTTCATGGATTCACTTGGAGTCCCCCTCCCAATGAACCAGTCATTAATCTCTCTGAAACTGAAACTGACACCACAAAAGCTAAGCCGCTAGTCGCATTGGGGAAGCCAAGATTGCTGGAGGAACTTTATCGTCAAATAGATTAA 1545 0.4149 MEFAPILLLILFFIIPLFLVTKLLKSKKPKLPPGPKPWPIVGNLPEMLANKPTFRWIQSIMNDLDTEIACIRLGSIHVVLVASPSIAREFLMKQDAIFASRPLNWSSKYVSSGYLTTTITPYGEQWKKMKRVMVEELISPKRHQWQHDKRAEEADNLVRYVYNQIKNGSGLVDLRRVTKHYVGNVMRRLLFNKRYFGNGSEDGGPGGEELEYVDALFTAIRHIYAFSVSDFLPWLRWLDFEGHKKILKEATDIIRKYHDPIIEERFHEWRNGTRTHQEDWLDVLISLKDANNNAFLTPEEIKSQIMEITVGAIDNPYNNVEWILSEMLNQPKILQKAIEELDNVVGKERLVQESDIPKLNYVKACIREGFRLHPIADFNVPHVSMEDTIVANYFIPKGSHILIRRQGIGQNPRVWEEPLKFKPERHLKKDVSLAEPNLELFTFGTGRRYCPAVTLGSTITIMLFARLVHGFTWSPPPNEPVINLSETETDTTKAKPLVALGKPRLLEELYRQID 514
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc271902g00028 514 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Stsc271902g00028 514 PANTHER CYTOCHROME P450 98A9 8 512 - -
Stsc271902g00028 514 Gene3D Cytochrome P450 24 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 SUPERFAMILY Cytochrome P450 32 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00028 514 FunFam Cytochrome P450 9 24 508 - -
Stsc271902g00028 514 Pfam Cytochrome P450 32 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc271902g00028 Stsc-Chr271902 154875 158253 Dispersed/Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271902g00028 12 510 Cytochrome P450 AT4G39950 53.755 0.0 578
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271902g00028 - K12153 gmx:100809902 630.172