Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271902g00026 ATGGAATCTTCTCATGCCATCTTGCTCATTCTCTCTTTCATTATACCTCTCTTCATCTTCATCATCAAACTACTCAAATCAAAGAAGCCTAAGCTCCCACCAGGTCCCAAATCATGGCCTATAGTTGGTAACATCCCTGAAATGCTTACTAACAAACCCACATTCAGATGGATTCAGAACATCATGGATGATCTCGACACCGAAATTGCATGCATCCGTCTAGGTAACATTCATGTCATCCTGGTGACGAGCCCTTCCATTGCACGTGAATTTTTAATGAAACAAGATGCGATTTTCGCATCAAGGCCATTGAATTGGTCTAGTAAATATGTCTCATTGGGATACTTAACCGCAACTATAGCACCCTTTGGAGAACAATGGAAGAAAATGAAGAGAGTCATGGTTGAGGAATTGCTTTCGCCCAAAAGGCATCAATGGCTTCATGACAGAAGGGTGGACGAAGCCGACAACCTTGTCCGTTACGTGTATAACCAAATCAAGAATGGTAATGGCCTGGTGGATTTGAGGCATGTAGGGCAACACTATGTTGGAAACTTGATTAGGAGGTTGCTCTTCAATAAGAGATACTTTAGTAATGGTAGTGAAGATGGTGGTCCTGGTGTTGAGGAATTGGAGTATGTTAAAGCACTCTTCGTTGTGTTAAAGCACGTTTTTGCATTTGCTATTTCTGATTATCTTCCATGGTTGAGGTGGCTTGATTTTGAAGGTCATAAGAAAATAATTAAGGAAGCTACTAGCACGATAAGGAAGTACCATGATCCAATCATTGAGGAAAGGATTCATCAATGGAAGAATGGGACAAGGATACATCAAGAGGATTGGCTTGATGTTCTTATCGCTTTGAAAGATGCTAACAACAATCCATGTTTGACTCCGGAGGAAATCAAAAGTCAAATTATGGAAATTACAGTTGGAGCAATAGATAATCCATATAATAATGTTGAATGGGTACTTTCTGAAATGATGAATCAGCCAGAAATACTCCAAAAGGCCATCGAAGAATTGGACAGCGTGATAGGAAAAGAGCGATTAGTTCAAGAATCAGATATTTCAAAGCTCAACTATGTAAAAGCATGTATAAGAGAAGGTTTTCGTCTTCATCCAATCGCAGACTTCAATGTTCCTCACGTCTCAATGGAAGACACAGTTGTTGCCAATTATTTCATCCCAAAAGGTAGCCATATTCTTGTTAGGAGGCAAGGTATTGGCCGAAATCCAAGAGTTTGGAAAGAACCATTGAAGTTCAAACCTGAAAGACATTTGAAGAAAGATGGATGTCGTGTGAGTTTGGCTGAACCAAACTTGGAGTTGTTCACATTTGGCACTGGAAGACGAAATTGCCCTGCAGTGACACTTGGGTCTACAATGACTATCATGCTGCTTGCAAGGTTGGTTCATGGATTCACTTGGATTCCACCTCCCAATGAACCAATCATTGATCTCTCTGAACTTGAAAGGGGCACCACAAAAGCTAAGCCACTAATTGCACTGGGAAAGCCAAGATTACCGGTGGAAGTTTATCATCAAATTAATTAA 1557 0.4046 MESSHAILLILSFIIPLFIFIIKLLKSKKPKLPPGPKSWPIVGNIPEMLTNKPTFRWIQNIMDDLDTEIACIRLGNIHVILVTSPSIAREFLMKQDAIFASRPLNWSSKYVSLGYLTATIAPFGEQWKKMKRVMVEELLSPKRHQWLHDRRVDEADNLVRYVYNQIKNGNGLVDLRHVGQHYVGNLIRRLLFNKRYFSNGSEDGGPGVEELEYVKALFVVLKHVFAFAISDYLPWLRWLDFEGHKKIIKEATSTIRKYHDPIIEERIHQWKNGTRIHQEDWLDVLIALKDANNNPCLTPEEIKSQIMEITVGAIDNPYNNVEWVLSEMMNQPEILQKAIEELDSVIGKERLVQESDISKLNYVKACIREGFRLHPIADFNVPHVSMEDTVVANYFIPKGSHILVRRQGIGRNPRVWKEPLKFKPERHLKKDGCRVSLAEPNLELFTFGTGRRNCPAVTLGSTMTIMLLARLVHGFTWIPPPNEPIIDLSELERGTTKAKPLIALGKPRLPVEVYHQIN 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271902g00026 518 FunFam Cytochrome P450 9 25 512 - -
Stsc271902g00026 518 SUPERFAMILY Cytochrome P450 33 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 Gene3D Cytochrome P450 25 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Stsc271902g00026 518 PRINTS P450 superfamily signature 330 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271902g00026 518 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 7 515 - -
Stsc271902g00026 518 Pfam Cytochrome P450 33 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271902g00026 Stsc-Chr271902 142654 146566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271902g00026 10 514 Cytochrome P450 AT5G05260 52.874 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271902g00026 - K13027 gmx:100809902 643.654