Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271902g00019 ATGGCTGAAGATAAGAACAATGTGGTATTGTTGGATTTCTGGCCAAGCTCTTATGGGATGCGGGTGAAAATTGCTTTGCAAGAAAAGGGTGTCTCGTATGAGTGTAGGCAAGAAGATTTTGATGCTAAAAGTTCTCTGCTTTTGGAGATGAACCCAATTCACAAAACCATCCCAGTTTTGATTCATAATGATAAACCCATTTGTGAATCTCTCAACATAGTTGAGTACATTGATGAGGTTTGGAGCCATAAAACTACTTCTCTACTTCCCTCTGATCCTTACAAGAGATCCCAAGCAAGGTTTTGGGGCAATTACATTGATAAAAATGTATACAGCAAAGGAAAGAAGGTATGGAATGGGAAGGTGATGGAAGAGAAAGAAGAGAGCCAGAAGCAATTCATAGAATGCTTGAAGATCTTGGAGGAAGAGCTTGGTGACAAGCCATATTTTGGAGGTGATGAATTTGGGTATGTTGATGTGGCTCTCGTTCCCTTCACAAGCTGGTTTTATACATATGAGACATTAGGGAACCTAAGCATAGAGGAATTTGTTCCAAAACTTGTGAGTTGGACCAAAAGGTGCATGGAAAAAGAGAGTGTGGCTAAGTCACTCCCTCATCCTCATAAGATATATGGCTTTGCTTTGGAATATAGAGAGAAACATGGACATGACTAA 675 0.4 MAEDKNNVVLLDFWPSSYGMRVKIALQEKGVSYECRQEDFDAKSSLLLEMNPIHKTIPVLIHNDKPICESLNIVEYIDEVWSHKTTSLLPSDPYKRSQARFWGNYIDKNVYSKGKKVWNGKVMEEKEESQKQFIECLKILEEELGDKPYFGGDEFGYVDVALVPFTSWFYTYETLGNLSIEEFVPKLVSWTKRCMEKESVAKSLPHPHKIYGFALEYREKHGHD 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271902g00019 224 Pfam Glutathione S-transferase, N-terminal domain 9 79 IPR004045 -
Stsc271902g00019 224 FunFam Tau class glutathione S-transferase 1 89 - -
Stsc271902g00019 224 CDD GST_N_Tau 8 81 - -
Stsc271902g00019 224 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Stsc271902g00019 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Stsc271902g00019 224 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Stsc271902g00019 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 213 IPR010987 -
Stsc271902g00019 224 Gene3D - 92 224 - -
Stsc271902g00019 224 SFLD Main (cytGST) 5 221 - -
Stsc271902g00019 224 Coils Coil 123 143 - -
Stsc271902g00019 224 Gene3D Glutaredoxin 1 91 - -
Stsc271902g00019 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 211 IPR045073 -
Stsc271902g00019 224 SFLD Main.3: Omega- and Tau-like 5 221 IPR045073 -
Stsc271902g00019 224 FunFam Glutathione S-transferase U20 92 224 - -
Stsc271902g00019 224 Pfam Glutathione S-transferase, C-terminal domain 125 193 - -
Stsc271902g00019 224 SUPERFAMILY GST C-terminal domain-like 79 221 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271902g00019 Stsc-Chr271902 96403 97888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271902g00019 6 221 Glutathione S-transferase Gene Family AT1G78370 60.185 3.85e-97 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271902g00019 K00799 - gmx:100527221 362.844