Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271898g00014 ATGGTTCTCACTTGGCCACAGAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCATGAAGAAGAAATTGGAGGATGTTCAAGGTAGGGTCTTGGAACTCTTGGACACACTCAAGAAGGTTAAGGGTCAAGCTAGAGTTAGAGCTCTTAAGGAGCTTCACAAACTTGTTGAATCTCATGTTCAAGCAAGGAAAACAGTGGTGGAGAATAATGGGGTTGCTTTGGTTTCTTCACTTTTGGGGCCATTTACTTCACATGCTGTTGGGTCAGAAGCAATTGGGATACTTGTGAATTTGGATTTGAGTTCTGAGTTGAAGAGGGATTTGGTGAATCCAGCTAAGGTGTCATTGTTGGTTGATATCATGAATGAAGGAACAATTGAGACCAAGATGAATTGTGCAAAGTTGATTCAGATTCTGCTTATGGAAGGTAAAAATGACATTGAGAATTATGATATTGTTTCAAGTTTGAGTCTTTTGGTTGGGTTATTGAGGCTCATTAGGGATAAGAAACACCCAAATGGGATCTTAATTGGCCTCAAATTACTCAAATCTATATGTTCATCATATGAATCAGTTAGAAGCTCAGTGGTAAGCATAGGAACAGTTCCTCAATTGATTGAGTTATTGCCAAATTGGAACAATGAGTGCTTAGAGATAGCACTCCATGTTCTTGATTTGTTGTCAACAATTCCAGAGGGCATTTTAGCATTGAAGCAGTGTCCAAAGATTGTTCCAAATGTGGTGAAGTTGTTGATGAGGGTCTCAGAGGATTGCACACAATTTGCACTGTCAATATTGTTGGCTATTTACAAGATTGCCCCTGAGGAATGTGCATCACAAGCAGTGGAAGCTGGTTTGGCACCAAAGCTGTTGCTGGTGATTCAGAGTGGATGCAATCCAGTTTTGAAGCAGATGTCTTCTGAGTTCTTGAAAATGTGCAGTTTGAATTACTCTACCAATATCTTGATTTCAAAGTGTATGCTTACCACAACAATACAATGA 1098 0.3525 MVLTWPQNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMKKKLEDVQGRVLELLDTLKKVKGQARVRALKELHKLVESHVQARKTVVENNGVALVSSLLGPFTSHAVGSEAIGILVNLDLSSELKRDLVNPAKVSLLVDIMNEGTIETKMNCAKLIQILLMEGKNDIENYDIVSSLSLLVGLLRLIRDKKHPNGILIGLKLLKSICSSYESVRSSVVSIGTVPQLIELLPNWNNECLEIALHVLDLLSTIPEGILALKQCPKIVPNVVKLLMRVSEDCTQFALSILLAIYKIAPEECASQAVEAGLAPKLLLVIQSGCNPVLKQMSSEFLKMCSLNYSTNILISKCMLTTTIQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271898g00014 365 Coils Coil 50 61 - -
Stsc271898g00014 365 PANTHER WDSAM1 PROTEIN 59 351 IPR045185 GO:0061630
Stsc271898g00014 365 Gene3D - 49 355 IPR011989 -
Stsc271898g00014 365 SUPERFAMILY ARM repeat 75 347 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271898g00014 Stsc-Chr271898 161957 163532 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271898g00014 51 365 U-box Gene Family AT3G49810 60.000 2.98e-122 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271898g00014 - - gmx:100785092 457.988