Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271897g00019 ATGCATGATTTGCTTGAAGAAATGGGCAGACATATTGTAATCCAAGAATCTCCGAATGATCCTAGCAAGCGTAGCAGGTTGCGATACTACGAGGACATCGATCTTGTTCTTACTCAAAAAAAGGGAACTGAAGCAACTCATAGCATCATTTACCCCAGAACGTTTGATAAAATGCATTCTGATGTGCGTTGGAAAGGTTTAACCTTTTCAAATATATCTCAGTTGAAGATCCTCATTTTAGATGGTTTAAATGTTCCTGTTGTTAGCTATATTCCTTGTTCATTAAGAGTTTTTCATTGGGAAAGTTGTCCAATGGAAACTCTACCATTTATAGATCAATACTATGAACTTGTTGAAATTGATCTGCAAAATAGCTCCAGCATTGTACAAGTATGGCATGGACAAAAGTTTCTGGAGAAGCTGAAGTACTTAAGGCTGCACAATTGCTCTCGGCTGAAACAAATTCCAGATCTTTCTAAAGCACCCAATCTTGAAATACTTTACGTTCAAGGTTGTGGTGAACTGGAATATTTTCCCTCACATCTCACAAGCCACAAGGGCCTAGTTGAACTTAAGTTAATTCATTGCCCAAGTCTTGAAACTCTTGGGAGTAAATTGAAGATGAGTTCCCTCAAGAAACTAGATATTAGCGGCTGCATAAGTATGAGGAAACTTCCAGAATTTGGAAAATGCATGAAAAATTTATCAATTCTTTCTCTGTGGGGAATAGCCATAGAAGAACTACCGATGACGGTTGGACGTCTAGTTGGGCTATCTAATTTGAATATATATGATTGCAGGGAACTTCATTGCCTTCCCTCATCCATTGGTTGTTTGGTTAGCCTAAACCAGTTACACTTAGGAAAATGCAAAAGTCTTACTTGCCTTCCACACAGCATTCAAGAGTTAAAATCCCTCATGATTTTGAATATTTCTAATTGCCCAAATCTCCTTAAACCTTGGCATCCCCTCTCTGGTTTGACCTCATTGGTTACTCTAAAATTAGCGGCATGTTTTCTCACATCTCATGAGTCATTGTCTTACAATCTTGGCCACTTAGCGTCTTTGACGGATTTGGATTTATCAGAGAACAATTTTGTAAGAGTTCCAATAAATATCCATAAACTCTCCAAGCTTAGATGTCTAAATCTAGAAAACTGCCTTCATCTTAAGGTGTTACCAGAGCTTCCATCAAGTATAAGAGAGTTAAATGCACGAAATTGTATATCACTGGATTTATGGAATTCGAATGTTATATCAAAGACATGTTGTGGCTTTGTAGAATCAGCTAACCATGATCGTAATGAGTTCTTGCAAATGTGGCTCACAGAAAAGCAAATAAGGTTGACCACAGAATTTCCATGGTGGTTTGTCCATCAGGAACGGGGCAATGGAGTATCAGTCACATTGCCACATCATGAAACCTTGTCACTTGCTCTCTGTTTCCAATTCTGCCCAATGAGAGGGACTGGGACTTTTGTTTTTAATCCTTTGGTGATTTGCAACGGTAAAGAATTCATCAAAAAAAGTTTAACTACAGAGATGCGTGAAATCAAATATACTCAGTATTTCATCCTCTGCTTGACTAGTGACTATTTTGTTGACCAATTTTGCCAAGACTATCGCTTTGAACTGGTACTTCCTTATTATGTTCCAATTAAAGTACAGAGTTGTGGGGCTCGTTGGGTGTGCAAGCAAGACATTCAAGATTTCAAGAAACAAAAAGCCGAACGGAAACTTGAAAGAGAAAGGCAACTTTTGATCTGA 1767 0.3814 MHDLLEEMGRHIVIQESPNDPSKRSRLRYYEDIDLVLTQKKGTEATHSIIYPRTFDKMHSDVRWKGLTFSNISQLKILILDGLNVPVVSYIPCSLRVFHWESCPMETLPFIDQYYELVEIDLQNSSSIVQVWHGQKFLEKLKYLRLHNCSRLKQIPDLSKAPNLEILYVQGCGELEYFPSHLTSHKGLVELKLIHCPSLETLGSKLKMSSLKKLDISGCISMRKLPEFGKCMKNLSILSLWGIAIEELPMTVGRLVGLSNLNIYDCRELHCLPSSIGCLVSLNQLHLGKCKSLTCLPHSIQELKSLMILNISNCPNLLKPWHPLSGLTSLVTLKLAACFLTSHESLSYNLGHLASLTDLDLSENNFVRVPINIHKLSKLRCLNLENCLHLKVLPELPSSIRELNARNCISLDLWNSNVISKTCCGFVESANHDRNEFLQMWLTEKQIRLTTEFPWWFVHQERGNGVSVTLPHHETLSLALCFQFCPMRGTGTFVFNPLVICNGKEFIKKSLTTEMREIKYTQYFILCLTSDYFVDQFCQDYRFELVLPYYVPIKVQSCGARWVCKQDIQDFKKQKAERKLERERQLLI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271897g00019 588 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 224 412 IPR044974 GO:0006952
Stsc271897g00019 588 SUPERFAMILY L domain-like 1 427 - -
Stsc271897g00019 588 Gene3D Ribonuclease Inhibitor 226 447 IPR032675 -
Stsc271897g00019 588 Gene3D Ribonuclease Inhibitor 58 225 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271897g00019 Stsc-Chr271897 130394 132607 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271897g00019 1 312 WRKY Transcription Factor Family AT4G12020 33.435 8.14e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271897g00019 - - ahf:112769348 679.093