Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271897g00010 ATGCGGCTTCTCCACCCACACCAGACGACACTCGTTGTTAGTAACCTTACACCGCCGGAGTACACTGACGAGGGACAGAGATTGGCAGAAAATGAAGCCTTTGTCCTCTTTCATTTGAAGGCTTTTAAACAACGAAAGCCTGAAGAAGAATATTTGGATTCATCTAAACAGGTGGTCAAATATTGTGCTGGTCTTCCATTGGCACTTGAGGTATTGGGTTCCCATCTTTATGGTAGATCTATTGAAGCTTGGCATAGTGCTCTTGCAAAATTAAAGAGCTTTCCACATGTTGACATTTTTGAGACGTTGAAAATAAGTTACGATGGTTTAGATTCCATGGACAAAGATATTTTTTTGGACATTGCTTATTTTTTCAAAGGTCGTTCTAAACGACATGTAATAAATATATTAAAAGGGTGTGATTATCATGCTGAAATTGGTGTCACTACTTTGGTTGATAGATCTTTGCTCACTATAAATAACAAAGGTTCATATGAGGTGCTGGAGATGCATGATTTGGTTGAAGAAATGGGCAAACATATTGTAATTCAAGAATCTCCAAATGATCCTAGCAAGCGTAGCAGGTTGCGGTGTTACAAGGACATTGATCATGTTCTTACTCAAAACAAGGGCACTGAAGCAACTCATAGCATCATTTTGTCCAATATATGCTTTGAAATGCGTTGGAGAGATTTAACCTTGTCAAATATATCTCAGCTCAAGGTCCTCATTTTAAACGGTTTAAAAGTTCCCATTGTTAGCTATATTCCTTCTTCATTAAGAATTTTGCATTGGGAAGAATGTCCAATGGAAACTCTGCCGTTTATAGATCAATACTATGACCTTGTTGAAATTGTTATACGATTTAGCTCCAGCATTGTACAAGTATGGCATGGAAAAAAGTTTCTGGAAAAGCTGAAGTACTTAGAGCTGTATAATTGCTCTCGACTGAAACAAATTCCAGATCTTTCTGAAGCTCCCAATCTTAAAATACTTTACCTTGATGGTTGTTATGAAGTTGATGGTTTTCCCTCATATCTCACCCGCCACAAGAGCCTTGTTAAACTTATTTTAAGGAAGTGCTCAAGTCTTGAAACTCTTGGGAGTAAACTAGAGATGAGTTCCCTCAAGGAATTAGATATTGCCTTCTGCAAAAGTTTGAGGAAACTTCCAGAATTTGGAGAATGCATGAGACATTTATCAATTCTTAGTCTGTGGAGAACAGCCATAGAAGAACTACCTATGACGGTTGGATGTTTAGTTGGACTATATTATTTGAATTTATATGGTTGCAGCGAACTTTATTGTCTTCCCTCATCAATTGGCTGTTTAGTTGGCTTAAACTGGTTAAACTTTAAAAATTGCAACAGGCTTACTTGTCTTCCAGACAGTATTCAAGAGTTAAAATCCCTCCAAGTTTTTGATCTTTATAACTGCCCAAATGTTTATCAATCTTTGCATTCTCTCTCTGGAATAACCTCATTGGTTACTCTGAAATTAGAGGCATGTTTTTTCACATCTCAAGAGTCATTGTCTTACGATCTTGGCCACTTAGTGTCTTTGACGGATCTGGATTTATCAAATAACAAGTTTGAAAGGGTTCCAATAAATATCCATGAACTCTCCGGTCTTAGATGTCTGACTCTAGATGGCTGTGTTCATCTGAAGGTGTTACCAGAGCTTCCATCAAGTATAAGAAAGTTAAATGCACGTGATTGTATATCATTGGATCCATGGAATTTGAATGCTATATCAAAGACCTGTTTTGGCTTTGCAGCATCAGTTAAGTATGATCCTGATGAGCTCTTGCAAATGTGTGTGACACAGAAGCGAATAAGGTTGAACATAGGGGATGAAATTCCATTGTGGTTTGTCCATCATGAACAGGGTAATGGAGTGTCAGTCACATTGCCACATAATGAAACCATGGCACTTGCTCTCTATTTCCGATTATGCCCAATGAATTGGAATGAGAATTATAGAGAGTGTTCTTTTAATCTTTTTGTGATTTGCAACGGTGAAATTTTTCTAGAGTTCAATACAAGGATGATATGGGAAAGGGAAACTGAATATGCTCAGCATTTGGTCTTCTGCTTGACTAGTGATTATTTTGTTGACCAATTTTGCCAAGACTATTGCTTTGAACTGAAACTTCCTAATCAGTGTCCAATTGTAGTACAAATTTCTGGGGCTCGTTGGGTGTGCAAGCAAGATATGCAAGATTTGAAGGAAAAAAAGCAGAACTGA 2247 0.3756 MRLLHPHQTTLVVSNLTPPEYTDEGQRLAENEAFVLFHLKAFKQRKPEEEYLDSSKQVVKYCAGLPLALEVLGSHLYGRSIEAWHSALAKLKSFPHVDIFETLKISYDGLDSMDKDIFLDIAYFFKGRSKRHVINILKGCDYHAEIGVTTLVDRSLLTINNKGSYEVLEMHDLVEEMGKHIVIQESPNDPSKRSRLRCYKDIDHVLTQNKGTEATHSIILSNICFEMRWRDLTLSNISQLKVLILNGLKVPIVSYIPSSLRILHWEECPMETLPFIDQYYDLVEIVIRFSSSIVQVWHGKKFLEKLKYLELYNCSRLKQIPDLSEAPNLKILYLDGCYEVDGFPSYLTRHKSLVKLILRKCSSLETLGSKLEMSSLKELDIAFCKSLRKLPEFGECMRHLSILSLWRTAIEELPMTVGCLVGLYYLNLYGCSELYCLPSSIGCLVGLNWLNFKNCNRLTCLPDSIQELKSLQVFDLYNCPNVYQSLHSLSGITSLVTLKLEACFFTSQESLSYDLGHLVSLTDLDLSNNKFERVPINIHELSGLRCLTLDGCVHLKVLPELPSSIRKLNARDCISLDPWNLNAISKTCFGFAASVKYDPDELLQMCVTQKRIRLNIGDEIPLWFVHHEQGNGVSVTLPHNETMALALYFRLCPMNWNENYRECSFNLFVICNGEIFLEFNTRMIWERETEYAQHLVFCLTSDYFVDQFCQDYCFELKLPNQCPIVVQISGARWVCKQDMQDLKEKKQN 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271897g00010 748 ProSiteProfiles Leucine-rich repeat profile. 520 542 IPR001611 GO:0005515
Stsc271897g00010 748 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 121 IPR027417 -
Stsc271897g00010 748 Pfam NB-ARC domain 23 107 IPR002182 GO:0043531
Stsc271897g00010 748 Gene3D Ribonuclease Inhibitor 193 369 IPR032675 -
Stsc271897g00010 748 SUPERFAMILY L domain-like 170 577 - -
Stsc271897g00010 748 Gene3D - 27 111 IPR042197 -
Stsc271897g00010 748 Gene3D Ribonuclease Inhibitor 486 589 IPR032675 -
Stsc271897g00010 748 Gene3D Ribonuclease Inhibitor 370 485 IPR032675 -
Stsc271897g00010 748 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 397 575 IPR044974 GO:0006952
Stsc271897g00010 748 PRINTS Disease resistance protein signature 371 387 - -
Stsc271897g00010 748 PRINTS Disease resistance protein signature 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271897g00010 Stsc-Chr271897 78070 84118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271897g00010 49 498 WRKY Transcription Factor Family AT4G12020 32.762 8.31e-51 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271897g00010 - - ahf:112769348 877.856