Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271897g00007 ATGAACCTTCAATTGAAAAGTACAACGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCAGCTCTCTACTTTGCAACAGCCTTGGGGTGCAATGAATCTGATGCAAGTTGTGGGAGCTGTCAGTTTCCAGCATCGTCGCCTTGACATTCTAGATGATATGGACCCTGCCATCGCTGATATTAACAAGCAATGCTGGCAGACAGATGCAAAGTCGAGGCCTACATTTGCGGAAATAATGGCGGTGCTGAAGCCGTTGCTGAAGCCAATCATTGCAAGTGCCGAGACCAGGTAA 294 0.466 MNLQLKSTTFIALESYYGSSQLSTLQQPWGAMNLMQVVGAVSFQHRRLDILDDMDPAIADINKQCWQTDAKSRPTFAEIMAVLKPLLKPIIASAETR 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271897g00007 97 Pfam Protein tyrosine and serine/threonine kinase 25 82 IPR001245 GO:0004672|GO:0006468
Stsc271897g00007 97 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 20 88 - -
Stsc271897g00007 97 SUPERFAMILY Protein kinase-like (PK-like) 21 81 IPR011009 -
Stsc271897g00007 97 Gene3D Transferase(Phosphotransferase) domain 1 17 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271897g00007 Stsc-Chr271897 63683 65101 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271897g00007 21 93 MAP Kinase Kinase Kinase AT1G73660 71.233 1.01e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc271897g00007 PK_Tyr_Ser-Thr 1.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271897g00007 - - jre:108980962 122.094