Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271896g00010 ATGGAAGCTGCTGAGGCTTCAACCACACCACAGTTGGCGCTCGCTGATACTGACATCAACTGGGACAGGCTGGACAAGACCAAGTTCCATGTAATTGGTGCAATACTCTTCACTGCTCAATCAGCCTTGCTTCATCCAACAGCAGTGGTGAAGACAAGAATGCAAGTTGCTGGGTCTGGACTCTCTCAAATGCGCGGAATGTCGGTGTTCACGCATATTCTAAGGAGTGATGGTGTTCCCGGAATCTTTAGAGGCTTTGGCACTTCTGCTATTGGATCAATGCCTGGGAGGGTCCTAGCTTTGACGTCTCTCGAGATGTCGAAAGACATTATGCTGAAATACACACAAGGTAGTGATATGCCGGAAGCTTCAAGAATCGGCCTCGCGAATGGTGTGGCTGGCATGTTTTCCAATCTGGTGTCCTGTGTATACTTTGTGCCTTTGGATGTGATCTGCCAGAGGTTAATGGTACAAGGTCTTCCTGGAACTGCTCCTTGCAGAGGACCATTCGATGTTATAAGTAAAGTTTTGAAGGCCGAGGGTTTCCGAGGCTTGTACAGAGGTTTCGGATTAACAGCCATAACTCAGTCACCGGCATCCGCACTTTGGTGGGGTTCATATGGTGCAGCTCAACACATAATTTGGAGGAGTTTGGGCTACAAAGATGATGCAGAGAACAAACCTTCACATTTTCAAATGGTGACGGTTCAAGCTACAGCGGGGATGGTGGCCGGCGCTTGTTCATCGGTTATCACTACGCCAATAGATACTGTTAAAACACGTCTTCAGGTTATGGACAACTATGGTTCTGGAAGACCATCAGTGCTGAAGACAACAAAGACTCTACTTAAAGAAGATGGTTGGTGGGGATTTTACCGGGGCTTTGGACCTCGATTTCTAAACATGTCACTTTACGGAACAACGATGATCGTTACTTATGAACTGATAAAGAGATTGTCAGTACAATAG 969 0.4675 MEAAEASTTPQLALADTDINWDRLDKTKFHVIGAILFTAQSALLHPTAVVKTRMQVAGSGLSQMRGMSVFTHILRSDGVPGIFRGFGTSAIGSMPGRVLALTSLEMSKDIMLKYTQGSDMPEASRIGLANGVAGMFSNLVSCVYFVPLDVICQRLMVQGLPGTAPCRGPFDVISKVLKAEGFRGLYRGFGLTAITQSPASALWWGSYGAAQHIIWRSLGYKDDAENKPSHFQMVTVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGSGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELIKRLSVQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271896g00010 322 Gene3D Mitochondrial carrier domain 160 322 IPR023395 -
Stsc271896g00010 322 Gene3D Mitochondrial carrier domain 20 159 IPR023395 -
Stsc271896g00010 322 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 8 321 - -
Stsc271896g00010 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 110 IPR018108 -
Stsc271896g00010 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 232 319 IPR018108 -
Stsc271896g00010 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 125 213 IPR018108 -
Stsc271896g00010 322 Pfam Mitochondrial carrier protein 236 319 IPR018108 -
Stsc271896g00010 322 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Stsc271896g00010 322 Pfam Mitochondrial carrier protein 32 114 IPR018108 -
Stsc271896g00010 322 SUPERFAMILY Mitochondrial carrier 22 315 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271896g00010 Stsc-Chr271896 94025 96421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271896g00010 16 319 Chloroplast and Mitochondria Gene Families AT5G15640 51.307 7.30e-108 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271896g00010 K15121 - gmx:112997745 574.318