Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271896g00005 ATGCTGAATGTGCCAGTTATGTATATCATTGGAGCATTTATTCCTGCAACAATGATTGCTGTGCTTTATTATTTTGACCATAGTGTGGCATCTCAGCTTGCTCAGCAGAAAGAATTCAATTTAAGAAAGCCACCTTCTTTCCATTATGATCTACTTCTTTTGGGATTCATGGTTATATTATGTGGTCTAATTGGAATCCCCCCATCAAATGGTGTGATTCCACAATCTCCAATGCATACCAAAAGCTTAGCTACACTAAAGCACCAGTTACTTAGAAACCGGCTTGTTGCAACGGCTCGAAGCTGTATGAGTAAGAAGTCAAGCTTGGGACAACTATATGGAAGCATGCAAGAAGCTTACCAGCAGATGCAAACCCCTCTAGTTCACCAGGAACCTTCTCGAGGGTTAAAAGAGTTGAAAGAGTCGAGTATTCAATTGGCATCAAGCTTGGAGATTATGAATGCTACAATTGATGAGTCAGTATTTGATGTCGAGAAGGAAATCGATGACATATTACCTATCGAGGTTAAAGAACAACGAGTGAGCAACTTGCTCCAATCTTTGATGGTAGGAGGTTGCATAGCAGCAATGCCAGTCCTGAAAATGATTCCGACTTCTGTGCTCTGGGGCTATTTCGCTTTCATGGCCATCGAAAACTTACCAGGGAACCAGTTCTGGGAACGAGTCTTACTCATTTTCACCGCTCCAAGCAAAAGATACAAAGTTCTGGAGGAGTGCCACGCAACTTACATTGAAACCGTACCTTTAACGAGAATTGCAGCATTTACAATCTTCCAGAGTGTCTACTTGATTGCTTGTTTTGGTATCACATGGATTCCAATTGCTGGAGTTCTGTTCCCACTTATGATCATGCTTCTTGTTCCTGTAAGACAATACATTCTGCCTAAGTTTTTCAAAGCGGCGCACCTCCAAGATTTAGATGCAGCAGAATATGAAGAAGTACCCGCCACACCGTTCAACCAAGCCACGGAGGGAGAATTGGGCAAGACAGCTTCCTTTGCAGACGACGGAGAGATTCTAGATGGTATAATTACTCGAAGCCGGGGCGAGGTAAGGTGCGTTTGCAGCCCAAAGGCAAGGAGCTCCACTCCACCAGCCAGAGTGTTTCCAAGTTTCCAGAGAAGTTCAAGCTTCCCATACAGCCCTCGGATAAGAGAATTAAGAGGAAATCACAGCCCTCAAGGTGTTGGAAAAGGACCATTTAGTCCTGCAGAAGCAAGGCCATCCAATCTGAGTAATGGTGGTTGA 1269 0.4389 MLNVPVMYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPPSFHYDLLLLGFMVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLVATARSCMSKKSSLGQLYGSMQEAYQQMQTPLVHQEPSRGLKELKESSIQLASSLEIMNATIDESVFDVEKEIDDILPIEVKEQRVSNLLQSLMVGGCIAAMPVLKMIPTSVLWGYFAFMAIENLPGNQFWERVLLIFTAPSKRYKVLEECHATYIETVPLTRIAAFTIFQSVYLIACFGITWIPIAGVLFPLMIMLLVPVRQYILPKFFKAAHLQDLDAAEYEEVPATPFNQATEGELGKTASFADDGEILDGIITRSRGEVRCVCSPKARSSTPPARVFPSFQRSSSFPYSPRIRELRGNHSPQGVGKGPFSPAEARPSNLSNGG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271896g00005 422 MobiDBLite consensus disorder prediction 365 422 - -
Stsc271896g00005 422 MobiDBLite consensus disorder prediction 373 387 - -
Stsc271896g00005 422 PANTHER ANION EXCHANGE PROTEIN 1 322 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc271896g00005 422 Pfam HCO3- transporter family 3 88 IPR011531 GO:0006820|GO:0016020
Stsc271896g00005 422 Pfam HCO3- transporter family 174 264 IPR011531 GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271896g00005 Stsc-Chr271896 71420 73459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271896g00005 1 406 Antiporters AT3G62270 72.236 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271896g00005 K24194 - gmx:100795777 699.893