Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00034 ATGGAGAGAGACGTGAGGTTTTTGTGTAGCTTCGATGGCGAGATCAAGTTCCACGTCCAAAACAACGAACACATCTACGATGGCGGCCATAACAAGATGGTCCGCGTTGCCAGCAATATCAAATTCAAGGACATGATCAGTGTACTCTTGGCCGTCAGCGGCGTCGCCGATGTGGCCTACTTCAAGTACCAGATCGCAGACTACGGCCTTGAAACCCTCGTCAGCGTCACCAACGACAGAGACCTCCGCAACTTGATGCGGGAGTTCGATCCCAGCGCCCCCGACGAGGTCAAGCGAATCTTCCTCTTTGCTAAGGAAAATCCTTCACCTTCCTCACTTCCTCCTCCTCCTGCTCAGCGCGTGGAGCGCGTCAATTCACCCGTGCAAGTTGCTGAGAATGCCTCCGAGCAGGTGGCAGCTGGAGGTCCGCGTGTGAGGGAGCGCGTGGTTCACTATTCGGCATGGTGGTGGTTACGCTTCATACCGCTGGTACTTCTTTTTTTGGTACCCTTGGTAATCAACCTTCATCAGCAAAACCATTACGACCTCAAGAGCATTGGAACCATCCCACCAACAGTTGGATCTGATGATCAATCCTCTGATGACTCCCACAATAAAGCTGCAGTAATTCCGGTATTTTCACAGAATTGA 651 0.5192 MERDVRFLCSFDGEIKFHVQNNEHIYDGGHNKMVRVASNIKFKDMISVLLAVSGVADVAYFKYQIADYGLETLVSVTNDRDLRNLMREFDPSAPDEVKRIFLFAKENPSPSSLPPPPAQRVERVNSPVQVAENASEQVAAGGPRVRERVVHYSAWWWLRFIPLVLLFLVPLVINLHQQNHYDLKSIGTIPPTVGSDDQSSDDSHNKAAVIPVFSQN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00034 216 SUPERFAMILY CAD & PB1 domains 23 112 - -
Stsc271895g00034 216 PANTHER OS05G0427100 PROTEIN-RELATED 4 136 - -
Stsc271895g00034 216 Pfam PB1 domain 26 103 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00034 Stsc-Chr271895 197405 198055 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00034 5 104 MAP Kinase Kinase Kinase AT5G57610 37.864 6.79e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00034 - - adu:107464532 225.328