Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00032 ATGTCATCTTCTTGTACAACAAAGTACGATGTCTTCATTAGCTTCAGAGGCGAAGACACCCGCGAAACCTTCACTGTCCATCTCTTTAACGCACTGGAAAACAAGACAATCAGGGCATACATGGATTGTCTCCTCCACAGAGGAGACGAAGTGTGGCCAGCACTCGAGAAAGCGATTGAGAGCTCGCTAATCTCGATCGTGGTTTTCTCGGAGAACTATGCGACCTCAAAGTGGTGCTTGGAGGAGCTGGTAAAGATTCTTGAATGGAGGGAAGATCACGGTCAGGTTGTTATACCGGTGTTCTATAGAACAGATCCGTCGCATATAAGGAACCAGAGTGGGAGTTTTGAGAGGGCGTTTGCTAAATATGAAAGAGATATTGCAGAGAGCGAATCCAACAGAGTCAAGATAAGCAAGTGGAGAGAAGCTCTCAAGAAATCAGCTAATATATCTGGCTGGCACTCCAGAAACTATGCGGACGACCATGAACTGATCAGAAAGGTGGTGAATGATGTATTGAAAATGCGTATCCTAAAGCACCCAATTGTGCCAACAGGCCTTGTTGGAACTGAAGAAATCCATAAAAGTGTTAAATTCTACATGAAGCAACATCGAGTCATGGGAATCTGGGGCATGCGCGGAGTAGGCAAGACCACCATTGCCAAAATGTTATTTGCAAAATACTTTCCTCATTATGACCATGTTTGCTATGCTGAAGATGCAAGAGAATATACTCCTCAAAGAGTTCTTTCTGATCTATTAAGGGAACAAATCTCCACTGATACAACAGGCTTTGTTAACAGCATGAGCAGCCTTAGCAACAAGAAAGTTCTCATTGTTCTTGACAATGTCAAGGATTATGATCAACCATTGTTGGAAGCAGTGTGCCAAGGATTCAAGAGACATAGTAGACAAAGTAAGCTTATTATAACAACATCTCATAAGGATTTGCTTGAGAAGAGAGTTGACTTTATATTCGAGGTCAAACAATGGGATGATGCAAAGTCTATAGAGCTTCTTAGCCTTAAAGCATTTGAGGAAAGCATCCCTCCAAAGCATTATGAGATTCTTGTGAATAAGTTTGTTGAGTATGCAGGGGGAATTCCTTTAGCTTTGAACCTTTTGGGTTCATATCTTCGATCCAAAAGCATTCAGTTCTGGGAAAGTACTTTGGAAAAGCTCCAGAAGCATCCTATTAAGCAGATTCAGGCTGCATTCACAGAGAGCTATGATGAATTGGAGAAGCTAGACAAGGAGATATTTCTTGACATTGCATTCTTCTTCCATGGAGAAAAGAAAGATCTTGTCACAAGCATATTAAAAGCTTGTGATTTTTCACCATTAAGAGGAATAGAGATACTTCAAGATAAAGCATTGATTACTATTATTCCATATAAAGAAACAATTGACATGCATGGCTTGCTAAAAGAAATGGCGTACGAGATTGTACATGAGGAAAATAGTAAAGACCCTAGAAAACGTAGCAGATTGAGGGATACTGAAGACATTTGTGATGTGCTCAAAGAGAACAAGAAATCGCTTGATGCAATTGAAGGCATAATATTAGATTTGTCTCAGATTAAGGACTTGCGTTTGAGTCCTGATGCATTTAAAAGGATGAATAGCTTGAGATTTCTAAAATTATATATCCCCTCGGGTCAGAGTTCTGGTAAGATGATCCTTCCTAAAGATCTTGAGCCATTTTCTGATAAACTAAGGTACTTTGAGTGGCATCAGTACCCTTTCAAGTCTCTTCCACCAAGTTTTTGTGCTAAGTTACTTGTTGAGATTCGCATGCCGCACAGCCATGTCAAGAGACTTTGGCAGGAAAAGCAGGAACTTGAGCATTTAGAAGGGATCGACTTAAGCGAATGCAAAGAGTTAGAAGAGCTTCCAGATTTGTCTAAGGCTAAAAGGCTCAGATGGGTGAATCTCTCTGGTTGTGAGAGTTTGGCTATTCTCCATTCATCTGTTTTTACCTCCGACACACTTGTTTCTTTGATACTGGATAGGTGCACAAATTTGCAGTGTGTTAAGGCCGAAAGGCATCTGAAGTCTCTGCAGCACATAAGTGTCAAAGGCTGCTCAAATCTCAAAGAATTTGCAGTATCATCTGATTTAATTGAAAACTTGGATTTGAGTAACACAAAGGTTGAAAAGCTGGACAGATCAATAGGTGAATTACTGAAGCTTGAGTGCCTCAATCTAGAAGGTTCAAGAGTCAAGCATCTTCCAAAGGAGCTATCAGCACTAAAATCTCTTAAGGAGTTGAAGCATTCATACATTGGACTAAAAATTGACAAGCAGCAGCTGCAAGACCTGTTTAACGGTTTATCATCTCTACAAATACTACATTTGAAGGAGTGTAGCCGCTTTTTTGAATTCCCTGACAACATTGATGCCTTATCGAAATTGCGCGAGTTAAGGCTAGATGGAAGCAATGTGATCTGGTTGCCTTCAACCATCAAGCGTCTTAAAGAGTTGGAAATTTTGTCCCTAAATAATTGCAGCTCTCTTGAGGCACTGCCAGAGCTTCCATCCTCTATCAAGGACTTCTCTGCTGATAACTGCACCTCATTGAAGTCTGTATCAGCTCTAAGTAATCTGGCAACAAAGATGGTGGGAAAGACGAAACGAATCTCATTCAATAATAGCTTGAAGCTGTCGGCCGGACACACATTGCATTCGATCATGGAAAGCATCCATTCAACAATGGTGAGTGCTGTATCTAGCAATGTCAAGAGAAGAAGCTATGCAACAGATGTCCATAGCAACAATTACAATAGTGTGGAGGTTTCCTTGCCTGGAGACACAATCCCTGAGAGATTTGCATATAAAACGGCGAAATCCTCCTCCATAACAATTGAACTCCCAGACTCTCCTTCCAACTTTCTTGGCTTTATCTATTCAGTTGTTCTATCACCTCGTCGTGGAATGAAGAAGCACGGTGCTAAAATCCGATGCAAATACAACTTTGCAGGAGGCAAGAATTATTCTTGGGAGGACATAACCATAAGTGAATTGAACTCAGATCATGTATATATATGGTATGATCCATTCCTCACAGATAAAATTCTTGGACAGTATAAGCCAAGTTTTCATCTCAAGTTCAGTGTGGCAACTGACACTGGGGAAGTTGATGACTCCATTGTTATTAAAGAGTGTGGTGTTCAAATCATCAATGAATCAGAATTGCAGAGATTTTTACTGGAGTTAGATAAGAAGAAAAAGGACTTGGAGGAGGAATCATCAGAGCAGCAGTTACAGCCACCACATGGATCTCAAGATCACAGCCATGTCCAGACTCCACCTCAAGACTTGAAGAGAGAAAGATTTGATGAGAAGCAGAGCAATGACACTGAAAGGCAGATATCAAAGCAACAAAGAGAAATGAATAAACAATCATCTTTTGATCGAAAAATCGAAGAGAAGATGGAATCCACTCCAAATGAAAACATGGCTAGTGGTGGAAAAAGTCAAGAGGAGAACGAGATAATCAAAGGCAAAGGAAATGAAGAACCACCAACTGAATCAGTAAAAAACAATGTGTTGGTGGACATTTCAAATGAAAATTGTTATGATCAGGCCAAACATTTGGAAGAAAAGCAAAAGGAAAAGGAACCAATGCATCTTGAAACATCTGAATGTCAAGACCACACTAGCAATTTACAACAAACTGAAAATCTTTGGAAACAAAGCGTAGATGCTAAGAAAATACAAGAACTACACAAAGAAAAAACTATTGAGCATTCTCAATACATTAGTTCCAGCGCACCTTCACATGGCGAGAAGAGGACTTCTGAGTTGACTATGAAAGAACTCCACCGCCACTTTAAGAAGATAGCCAAGAAGGCAAAAGTTGAAAGCAACCCTGCAACTGCAAGTGCAACTCAAGCTACAAATTTAGCCATGGAAACTTTTCATCCTTCCAGTTCCAAGATTAAAGGCAAAAGAGTAGTAGAAGTCCAGTTGAACCAGGTTCCAACTCAAAATACTTACCTTGATGTTTCTGCACTTTGTCGTTGGCTTCAAGTTCAAGCGCTTCGTTCAGTGAGCGTTGCCAGATACGCTGAGATGAAGTTCGAAGTGGCGAAACAGGAAAAAGAGGAAGAATTAAGAGTTGCAAGAGAAGAAAATGCAAAGGTTGAAGAGGCTTTGAAAACAATGGAGGAGAGGGTTTCACATGTTGAATCATTGGAGAAAAGAGTTGAGGATTTGAATTCTGAGGTGGCTTGTTGGAGAAGTAAATATGAAGAAAGTCAAAAGAAACTTGAAGATGAGAATCGAGAATGGCGAGAGAAAGAATGTAGTTGGAAAAGAAGAGAGAGTGAGGTGATTGAGGAGGAGGCGGTAAGTCAGTGGGTTAAGTCGTTTGAACATTGCATGTTGCAGGTTTCCACTTTGTATCCAAACATTGATTTAAGTAGGGTAGGAGCTTTCAAGGAGATTCAGAATGGGGAGATAGTATCCCCCTCGGATTCGGAGGAGACTGAAGAAAGTGAAGAAGACACCATGGCTGTCTCCGGGGCTGGGGAACTTTGA 4542 0.4064 MSSSCTTKYDVFISFRGEDTRETFTVHLFNALENKTIRAYMDCLLHRGDEVWPALEKAIESSLISIVVFSENYATSKWCLEELVKILEWREDHGQVVIPVFYRTDPSHIRNQSGSFERAFAKYERDIAESESNRVKISKWREALKKSANISGWHSRNYADDHELIRKVVNDVLKMRILKHPIVPTGLVGTEEIHKSVKFYMKQHRVMGIWGMRGVGKTTIAKMLFAKYFPHYDHVCYAEDAREYTPQRVLSDLLREQISTDTTGFVNSMSSLSNKKVLIVLDNVKDYDQPLLEAVCQGFKRHSRQSKLIITTSHKDLLEKRVDFIFEVKQWDDAKSIELLSLKAFEESIPPKHYEILVNKFVEYAGGIPLALNLLGSYLRSKSIQFWESTLEKLQKHPIKQIQAAFTESYDELEKLDKEIFLDIAFFFHGEKKDLVTSILKACDFSPLRGIEILQDKALITIIPYKETIDMHGLLKEMAYEIVHEENSKDPRKRSRLRDTEDICDVLKENKKSLDAIEGIILDLSQIKDLRLSPDAFKRMNSLRFLKLYIPSGQSSGKMILPKDLEPFSDKLRYFEWHQYPFKSLPPSFCAKLLVEIRMPHSHVKRLWQEKQELEHLEGIDLSECKELEELPDLSKAKRLRWVNLSGCESLAILHSSVFTSDTLVSLILDRCTNLQCVKAERHLKSLQHISVKGCSNLKEFAVSSDLIENLDLSNTKVEKLDRSIGELLKLECLNLEGSRVKHLPKELSALKSLKELKHSYIGLKIDKQQLQDLFNGLSSLQILHLKECSRFFEFPDNIDALSKLRELRLDGSNVIWLPSTIKRLKELEILSLNNCSSLEALPELPSSIKDFSADNCTSLKSVSALSNLATKMVGKTKRISFNNSLKLSAGHTLHSIMESIHSTMVSAVSSNVKRRSYATDVHSNNYNSVEVSLPGDTIPERFAYKTAKSSSITIELPDSPSNFLGFIYSVVLSPRRGMKKHGAKIRCKYNFAGGKNYSWEDITISELNSDHVYIWYDPFLTDKILGQYKPSFHLKFSVATDTGEVDDSIVIKECGVQIINESELQRFLLELDKKKKDLEEESSEQQLQPPHGSQDHSHVQTPPQDLKRERFDEKQSNDTERQISKQQREMNKQSSFDRKIEEKMESTPNENMASGGKSQEENEIIKGKGNEEPPTESVKNNVLVDISNENCYDQAKHLEEKQKEKEPMHLETSECQDHTSNLQQTENLWKQSVDAKKIQELHKEKTIEHSQYISSSAPSHGEKRTSELTMKELHRHFKKIAKKAKVESNPATASATQATNLAMETFHPSSSKIKGKRVVEVQLNQVPTQNTYLDVSALCRWLQVQALRSVSVARYAEMKFEVAKQEKEEELRVAREENAKVEEALKTMEERVSHVESLEKRVEDLNSEVACWRSKYEESQKKLEDENREWREKECSWKRRESEVIEEEAVSQWVKSFEHCMLQVSTLYPNIDLSRVGAFKEIQNGEIVSPSDSEETEESEEDTMAVSGAGEL 1513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00032 1513 Gene3D Ribonuclease Inhibitor 475 707 IPR032675 -
Stsc271895g00032 1513 Gene3D Ribonuclease Inhibitor 708 920 IPR032675 -
Stsc271895g00032 1513 Gene3D - 5 176 IPR035897 -
Stsc271895g00032 1513 MobiDBLite consensus disorder prediction 1079 1179 - -
Stsc271895g00032 1513 Gene3D - 177 325 IPR027417 -
Stsc271895g00032 1513 MobiDBLite consensus disorder prediction 1486 1513 - -
Stsc271895g00032 1513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 424 IPR027417 -
Stsc271895g00032 1513 SUPERFAMILY "Winged helix" DNA-binding domain 401 508 IPR036390 -
Stsc271895g00032 1513 MobiDBLite consensus disorder prediction 1102 1147 - -
Stsc271895g00032 1513 Pfam NB-ARC domain 203 414 IPR002182 GO:0043531
Stsc271895g00032 1513 Coils Coil 399 419 - -
Stsc271895g00032 1513 ProSiteProfiles TIR domain profile. 7 176 IPR000157 GO:0007165
Stsc271895g00032 1513 Pfam TIR domain 8 174 IPR000157 GO:0007165
Stsc271895g00032 1513 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 153 IPR035897 -
Stsc271895g00032 1513 FunFam Disease resistance protein (TIR-NBS-LRR class) 5 177 - -
Stsc271895g00032 1513 SMART till_3 8 150 IPR000157 GO:0007165
Stsc271895g00032 1513 Coils Coil 1062 1089 - -
Stsc271895g00032 1513 MobiDBLite consensus disorder prediction 1086 1101 - -
Stsc271895g00032 1513 SUPERFAMILY L domain-like 521 864 - -
Stsc271895g00032 1513 PRINTS Disease resistance protein signature 365 379 - -
Stsc271895g00032 1513 PRINTS Disease resistance protein signature 271 285 - -
Stsc271895g00032 1513 PRINTS Disease resistance protein signature 206 221 - -
Stsc271895g00032 1513 PRINTS Disease resistance protein signature 823 839 - -
Stsc271895g00032 1513 Gene3D - 331 414 IPR042197 -
Stsc271895g00032 1513 Coils Coil 1358 1434 - -
Stsc271895g00032 1513 Pfam C-JID domain 934 1065 IPR045344 -
Stsc271895g00032 1513 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 701 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00032 Stsc-Chr271895 180061 186713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00032 4 831 WRKY Transcription Factor Family AT4G12020 30.129 1.04e-82 299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00032 - - aip:110266592 2368.58