Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00031 ATGGCCACTAAAAATAATGCTAAAAGATATGATGTGTTCATAAGCTTTAGAGGTGAAGACACCCGTAACAATTTCACTAGCCACCTTGTATCAGCTATGTCTGAAAAATCAATCAAAACCTACGTAGACTTTGAGATTGAAAGAGGAGATGAGATCTCACAAGCACTAATCACTGCAATTGAGGACTCAAATGTGTCTGTCATTGTGTTCTCTCAGAACTATGCTTCATCAAGATGGTGCCTTCATGAACTTACCAAGATACTGGAATGCAAGAAGAATCTGGGTCGAGTTGTTGTGCCTGTGTTCTATAAAATTAACCCATCAAATGTACGGAAGCAGAAGAAGAACCAAGCACTCCCAAAACATGATGATAATGAGGAGCAATATTTGTGTGCTCTCGCGGATGGGAAGGTGCATCAGTGGACAGCTGCATTGACTGAAGCGGCAAATTTAGCTGGCTGGGATTCTCGAAACTACAGGGATGATGCTGATCTTGTCAAAGACATTGTCAACGATATTTTGAGAAAATTAGAATGTGAGTACCCCATTGAATTCAAAGATCTTGTTGGAATTGATGAGAATTGTAGATCTATTGAATTACTAATAGAAAAGTTTCCAGTAATTGGAATTTGGGGTATGGGAGGTATAGGTAAAACAACTCTTGCTAAGGTTGTATTCACCAAACTGTGTTCTCAATATGAAAGTTGCTGTTTCTTGGAAAATGTAAGAGAACAATCTAAGAAGCATGGATTAAATTATTTACATAATAAACTTCTTTCTGAGCTGCTAAAGGAAGAGCATCCCACAACTAGTAAAGTTGTAGGATCCACATTTGTTATGAGAAGGCTCCTTAGTAAAAAGGTTCTCATTGTGCTTGATGATGTGACTAGTTTTGAGCAGTTAGAGTATCTAGCAAGAGAATTTGATAGCTTTGGAGCAGGTAGCAGAGTTATTATAACAACAAGAGATAAGCATTTGCTGATTCTCGGAAGAGTTAATGAAATACATGAAGTCAAGGAGTTGAATTTTCAAGATTCTCTTAAGCTTTTCAGCTTGAATGCATTCAAAGACTACTTCAATAATCCTCACATGGAAGAATATAAAGAGCTGGCAGAAAGAGCAGTGGTCTATACCAAGGGCAACCCATTGGCTTTAAAAGTTCTTGGCTCACTTTTTCATTCCAAAAGTGTAGAAATATGTGAAAGTGTGCTTAAAAAGCTCAAGAAATATCCCAACTTGCATATTCAGAATGTCTTGAAACTGAGCTATGATGATTTAGATGATGCAGAGAAAGACATATTTCTCGATATTGCATTCTTTTTTGTAGGGGAAACAAAAGACCATGCCATAAGGATACTAGATGCTTGTGACTTATATGCAACAAGTGGAATAGAGACTCTTCAAGATAAAGCTCTTGTTACTATTCTGAAAGACAACACAATACAAATGCATGATCTAATTCAAGAAATGGGTTGGGAAATAGTTCGTCAAGAAGCTATTAAAGACCCTGGAAGACGCAGGCGTTTGAGAGACACCGAAGAAGTCTACGATGGAACTGATGCAGTTGAAGGCATAGCAGTAGATGTGTCTAAGATTCAGGAACTGCAGTTGAGTCCTGACATCTTCAAAAAGATGACTAATATAAGACTGCTCAAATTCTATGCTCCCTTGAATGAAAGATCATGCAATGTGCACCTTCCTTTAGGTCTTGAGTCACTCTCACATAAATTAAGGTGCCTTGAATGGAATGGATATCCTTCAATGTCACTACCAGCAACTTTCTGTCCGGAAAATCTCGTTGTGCTTAGCATGCCACATAGCCGTGTCAAAAGACTATGGGATGGAGCTCAGGATTTGGTCAACTTAAAGGAAATCGTTCTTTATGCATCCCTACAGCTAATGGAGCTCCCAGACTTATCTAAGGCATCAAAGCTTGAAATATTAGATGTCTCCCACTGTGTGAATTTGTACCATGTTCACCCTTCTATTATGTCTCTCAACAAAATTGTTGATCTGATTCTATATGGTTGCAAAAACCTCAAGTCTCTTCATGCAAGAGCCATCAAGAACCTGTTTGTCAATGGTTGCTTGAACCTCAAGGAATTTTCACTAGCCTCGAAAGAACTATACATGCTGGACTTAAGAGGAACGTCGATCGAGACGTTAGACAAGTCCATTGGGAGTCTCAGCAAACTTGACAAGTTCTATGTCTGCGAGTCTCTAAAACATGTTCCAAAGGATTTACCTTCGATGACATGTCTTAGGGACCTGAGTCTTCATAATTGCACTCAACTTGACGATTCAAATTTGCAGAACTTACTTGATGCTTCACATTCTGTGCAAAAGCTGATTTTGAATGGTTGTTTTAACTTGTCTGAAATCCCTCACAATATCAAGCATCTTTCTCACCTTGAGCATTTGTCAATAAGGGATTGCGTTCGCCTTCGCCATGTTCCTACCCTTCCCCCATCTGTTGGACATTTAGATGCCATCAATTGCAGTTCCCTTGAGACAATAGTGTTGTCTTCAACCCCTCCAAGACAAATTTGGAGAAAGAACATAAGCATTTCATTTGAAAATTGTGTGAAATTGAATGAACATTCTAGAATTAGTATAATGGAACATGCTAGTGTCATGATGAAGCTACTTGCATCTGCGAATGTTGATATTCCGGAAACAATGCATACAAGTGGTACTGTTTGTTTGCCTGGTAGCAAGGTGCCAGCAACATTCAAGAACAGGACTACACAGGGTTCCACTGCTGAGGTCGAGCTTCCTCTGCCTTCGCCTTCATTAGACTTAGTAGGCTTGATTTTCTGTGTTGTTCTTTTGCCATTTTGCTCAAATGGCAAGTATGAGTATCATCGAATAGTATGTCGATGGTGCTTGGAAGACGATGATAACAGGGTTGGATACACGAGAAGGTGGTATTACAAAGACATCGCGGAGTTGAATTCAGATCATGTTTATTTATGGTATGAAGCATCATGTGGCAAGATAATTGAGGCAGCAAAAGAAGAAAGCAAGTATAAGTGCATCATTGGTAACATTAAACTTTCATTTGAGTTCTATGTTGAGACATATAAGCTCAGTGAGCCTAAACAGATTGGGTTAATTGGTATAAAAGAGTGTGGAGTGTGTCCCATACATTCCTCAGAGTGTGATGATTCTATAAACAAAATAGAATTGGATCACATCACAACTTCAATTGAAAGTTCTGAAGAAATGAAAGATAAGAAAGAGGAACCTCATCAACTGAAGAATCAAGAAAAAGATTACTGTGATTGCCTAATAGGTATGAACACATCTTGA 3312 0.3865 MATKNNAKRYDVFISFRGEDTRNNFTSHLVSAMSEKSIKTYVDFEIERGDEISQALITAIEDSNVSVIVFSQNYASSRWCLHELTKILECKKNLGRVVVPVFYKINPSNVRKQKKNQALPKHDDNEEQYLCALADGKVHQWTAALTEAANLAGWDSRNYRDDADLVKDIVNDILRKLECEYPIEFKDLVGIDENCRSIELLIEKFPVIGIWGMGGIGKTTLAKVVFTKLCSQYESCCFLENVREQSKKHGLNYLHNKLLSELLKEEHPTTSKVVGSTFVMRRLLSKKVLIVLDDVTSFEQLEYLAREFDSFGAGSRVIITTRDKHLLILGRVNEIHEVKELNFQDSLKLFSLNAFKDYFNNPHMEEYKELAERAVVYTKGNPLALKVLGSLFHSKSVEICESVLKKLKKYPNLHIQNVLKLSYDDLDDAEKDIFLDIAFFFVGETKDHAIRILDACDLYATSGIETLQDKALVTILKDNTIQMHDLIQEMGWEIVRQEAIKDPGRRRRLRDTEEVYDGTDAVEGIAVDVSKIQELQLSPDIFKKMTNIRLLKFYAPLNERSCNVHLPLGLESLSHKLRCLEWNGYPSMSLPATFCPENLVVLSMPHSRVKRLWDGAQDLVNLKEIVLYASLQLMELPDLSKASKLEILDVSHCVNLYHVHPSIMSLNKIVDLILYGCKNLKSLHARAIKNLFVNGCLNLKEFSLASKELYMLDLRGTSIETLDKSIGSLSKLDKFYVCESLKHVPKDLPSMTCLRDLSLHNCTQLDDSNLQNLLDASHSVQKLILNGCFNLSEIPHNIKHLSHLEHLSIRDCVRLRHVPTLPPSVGHLDAINCSSLETIVLSSTPPRQIWRKNISISFENCVKLNEHSRISIMEHASVMMKLLASANVDIPETMHTSGTVCLPGSKVPATFKNRTTQGSTAEVELPLPSPSLDLVGLIFCVVLLPFCSNGKYEYHRIVCRWCLEDDDNRVGYTRRWYYKDIAELNSDHVYLWYEASCGKIIEAAKEESKYKCIIGNIKLSFEFYVETYKLSEPKQIGLIGIKECGVCPIHSSECDDSINKIELDHITTSIESSEEMKDKKEEPHQLKNQEKDYCDCLIGMNTS 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00031 1103 Gene3D Ribonuclease Inhibitor 715 866 IPR032675 -
Stsc271895g00031 1103 Gene3D - 178 332 IPR027417 -
Stsc271895g00031 1103 SMART till_3 9 151 IPR000157 GO:0007165
Stsc271895g00031 1103 PRINTS Disease resistance protein signature 378 392 - -
Stsc271895g00031 1103 PRINTS Disease resistance protein signature 207 222 - -
Stsc271895g00031 1103 PRINTS Disease resistance protein signature 282 296 - -
Stsc271895g00031 1103 PRINTS Disease resistance protein signature 640 656 - -
Stsc271895g00031 1103 Gene3D - 341 427 IPR042197 -
Stsc271895g00031 1103 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 699 IPR044974 GO:0006952
Stsc271895g00031 1103 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 437 IPR027417 -
Stsc271895g00031 1103 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 179 - -
Stsc271895g00031 1103 Pfam NB-ARC domain 207 411 IPR002182 GO:0043531
Stsc271895g00031 1103 Pfam C-JID domain 902 1053 IPR045344 -
Stsc271895g00031 1103 Gene3D Ribonuclease Inhibitor 522 710 IPR032675 -
Stsc271895g00031 1103 Gene3D - 6 177 IPR035897 -
Stsc271895g00031 1103 ProSiteProfiles TIR domain profile. 8 177 IPR000157 GO:0007165
Stsc271895g00031 1103 SUPERFAMILY L domain-like 482 864 - -
Stsc271895g00031 1103 Pfam TIR domain 10 190 IPR000157 GO:0007165
Stsc271895g00031 1103 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00031 Stsc-Chr271895 176011 179929 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00031 5 822 WRKY Transcription Factor Family AT4G12020 32.509 1.18e-103 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00031 - - aprc:113851031 1468.75