Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271895g00028 | ATGTTGTCTTCTAGTACGACAGAGTACGATGTATTTATTAGCTTTAGAGGTGAGGATACCCGCAAAACCTTCACTGGCCGTCTGTTTAACGCTCTGAAAGACAGGGCAATCCGTGTATACATGGATCGTCTTCTCAAGGGAGGAGATGAAATCTGGCCAACACTCGAGAAAGCCATTGAGAACTCGCTAATGTCCATCGTGGTTTTCTCAGAAAACTTCGCCACCTCCAAGTGGTGCTTGGAAGAGCTAGTCAAGATTGTCCAATGGAGGGATCATCACGGTCAAGTTGTTATACCGGTGTTCTATAGAACAGAGCCGAGAGATGTACGGAGCCAGAGGGGGAGCTATGAGAAGGCGTTTGCTAAATACGAGAGAGAAGAGAAGGAATCCAACAGAGAGAAGATAAGCAAGTGGAGGCAGGCTCTCAAGGAAGCAGCTAATATATCTGGCTGGCATTCCACACACTATGAGGATGATGATGAACTCGCCAGAAAGGTTGTAAAAGATGTATTGGAAATGCGTATCCTAAAGCATCCCAATATACCAACAGGCTTGGTTGGAATAAAACAAATTCGTAAAAGTATTAAATTCAAGATGAAGCAACACGGAGTAATTGGAATTTGGGGTATGCCAGGAATAGGGAAGACAACCATAGCTAAAATGTTATTTGCAAAATCCTTTCCTCATTATGACTATGTTTGCTATGCGGAAAATGCAAAAGAATACACTCCTCAAAGACTTCTCTCGGAGCTACTAAGGGAACAAATTTCCACTGATGAGGCAGGATTCGTCAACACTTTGAGCCGCCTTAGCAATAGGAAAGTTCTCATTGTTCTCGACAATGTCAAGGAGTATGATCAAACATTGTTAGAAGCAGTGTGCGAAGGATACAAGAGCCACAGTCGAGACAGTAAACTTATTATAACAACCACAGATAAGGATTTGCTTGAAAAGAGAGTTGAGTGGACATTTGAAGTCAAACAATGGACCGATTCAAAATCTATAGAGCTTCTTAGCCTCAAAGCTTTCGAGGAAAGAATCCCTCCAAAGCCTTTCGAGAATCTGGTAAATATGGTTGTTAAGTATGCTGGGGGAATTCCATTAGCTCTCAACGTTTTGGGTTCATATCTTCGACACAAAAGCATTCAGTTCTGGGAAAATACTTTGAAAAAGCTCCAGAAGCATCTTCATCAGGGCATTGATATTGCCTTTAGAAAAATTTATGATGAACTGGACAAGCCAGACAAGGAGATATTTCTTGATATTGCATTCTTTTTCCATGGCGAAAAGAAAGATCTTGTCTCAAGCATATTAGAAGCATGTAATTTCTCAGCAATAAATGGAATAGAGGTCCTTCATGATAAAGCAATGATTACTACTATTCCATTTAAAGAAACAATCGACATGCATGGCTTGCTAAGGGAACTGGCTTACAAGGTCGTACACGAGGAAAACAGTAAAGACCCTAGAAAACGTAGCAGATTGAGGGATACTCAGGACATTTGTGACGTACTCAAAGAGAACAAGAAATCGCTTGATGCAATTGAAGGCATAATATTAGATTTGTCTCAAATTAAGAACATGCATTTGAGTCCCGATGCATTTAAAAGGATGAATAAGTTGAGATTTCTAAAATTCTATATCCCTTCCAATCAGATTTCTGGTAAAATGGTCCTTCCTAAAGACCTTGAGCCATTTTCTGATAAACTAAGGTACTTCGAGTGGCATCAGTACCCTTTCGTTTCTCTTCCACCAAGTTTTTGTGCTAAGTTACTTGTTGAGATTCGCATGCCTCACAGCCATGTCAAGAGACTTTGGGAGGAGAAGCAGGAACTTGAGCATTTAGAAGGGATCGACTTAAGTGAATGCAAAGAGTTAGAAGAGCTTCCAGATTTGTCTGAGGCTAAAAGACTCAAATGGGTGAATCTCACCGGTTGTGAGACTTTGACTATTCTTCCTTCATCTGTTTTTTCCTCAAACACACTTGTTTCTTTGATATTGGATAGGTGCACAAATTTGCAGTGTGTTAAGGCCAAAGGGCATCTGAATTCACTGCAGTACATAAGTGTCAAAGGATGCTCAAATCTCACAGAATTTGCAGTGTCATCAGATTTGATAAAAAACTTGGATTTGAGTTACACAAAGATCGAAGAGCTGGACAAATCAATCGGGAAATTACAGAAGCTTGAATCCCTCAATCTAGAAGGATCAAGAGTTAAGCATCTTCCAAAGGTGCTATCGGCACTGAAATTGCTTAAGGAGTTGAAGCATTCATACAATGGACTAGAAATTGACAAGCAGCAGCTGCAAGACCTGTTTAACAGCTTACACTCTCTTCAGATACTACATTTGAAGGATTGTAAGAACTCATTTGAATTCCCCGACAACATCATAGCCTTATCAAAATTGCGCGAGCTAAGGCTAGATGGAAGCTATGTGACCAGGCTACCTGCAACTATCAAGGGTCTTCAAGAGTTGGAAATTTTGTCCCTAGATAATTGCATTTATCTTGAGACACTGCCGGAGCCTCCATCTTCTATCAAGGAGTTCTCTGTCGTTAACTGTAGCTCATTGTCTGTAGCACATCTAAACACTCTGGCAACAAAGATGGTGGGAAAGACAAAACGCATCTCATTCAATAATAGCTTGACATTGTCGTCTGGAGACATATTGCATTCAATCATGGAAAGCATCCATTCAACAATGATGAGTGCTGTATCTAACAATGCGACGGTAAGAAGCTATGGAACAGATGTCCATAGCTACAATTACAATAGTGTGGAGGTTTCTTTGCCAGGAGACACAATCCCGGAGCAATTTGCATATAAAACGGAGAAATCCTCCTCCATAACAATTGAACTCCCTGACTCTCTTTCCAACTCCATTGGCTTTATCTATTCAGTGGTTCTTTCACCGCGTCATGGAACGAAGAAGCACCGTGCCAAAATCCGATGCCAGTACAGCTTTGCAGGAGGCACAAATTCTTCTTGGGAGGACATAACCATAAGTGAATTGAATTCTGATCATTTATTTATATGGTATGATCCTTTCCACACTGACAAAATTCTTGGACAAGATAAGCCTAGTTTTCATCTTGAGTTCAGTGTTGTTGCAACTGACACCGGGGAAGTTGATGACTCCATCATTGTTAAGGAGTGTGGTGTTCAGATCATAAATGAATCAGAATGGCAGATATTCTCACAAGAATTTGATAAGATGAAAAAGGATATTGAGGAGGAATCATCAACGCAGCAGTTACATCCATCACATGGATCTCAAGATCACAGCCATGTCCAGACTCCACCTCATGACTTGAAGAAAGAAAGAATTGATAAGCAGAATAATGACACTGAAAACCAGATTTCAAAGCGACAAACAGAAATGAATGAACAATCATCTGTTGATCTCCAAATTGAAGAGAAGATGGAATCCGCTCCCAATGAAAACAAGACTAGTGGTGGAAAAAGTCACAAGGAGAACAAGCCAATCAAAGGCAAGGGAAATGAAGAACCACCAACTGAATCTGATGTTGGATTGCCTCTATCTATTGATTCAGTTAAAAACAATGCGTCTGTGGACATGTCAAAAGAAAATTATCATGATCAGCCAAATGCTATGGGAGAGGTTAAACATTTGGAAGAAAAACAAGAAGTTCATCATAGCATCCATGATATGACTGCTGATGAACCACACATAGCAAAGCGAAAGGAGGCAATGGATCTTAAAACATCTGAAGGTCAAGAACACACAAGCAATGCAGATCAGACGGGAAATCTTGGGCAACAAAATGTAGATGCTAAGAAACTGCAAGAGCTACACAAAGCAAAAACAACTTTGCTTTCCCAACCCATTAATTCCAGCAGCATACCTTCACACGGCATGAAGGTGGCTCCTAAGATGACTATGAAAGAACTCCGCCGCCACTTGAAAAAGGTAGACAAGAAGGCAAAACTTGATGAAGGCGACCCTGCAAGAGCAATTCAAGCTGGAAATTTAGCCATGGAAACTTATCATCATTCTTCCGGTTCGAAGATTAAAGGCAAAAGAGTAGAAGATATCCATTTGAATCAGGTTTCAACTCATAATACTTCTACTTCTATTGCGCAAATGCATGATAAAATTACCATTCCCTCCCTGGATGATCCTCAAGTGGCTCTAGAGTTGCTAAAACACTTCGATGCATCAGCTAAACGCCTCCAAATAACAGAGTTTGTGGACAATCATGTTGTATATCCATATGATCATTCCATAACAAAAGACCTTGATGTTTCTGCACTTTGTCGTTGGCTTCAAGTTCAAGCGCTTCGTTCAGTGAGTGTTGCAAGATATGCTGAGATGAAGTTCGAAGCTGCCAAACGGGAAAGAGAGGAAGAATTAAGACTTGCAAGAGAAGAAAATGCAAAGGCTGAAGAGGCTCTGAAAAAAATGGAGGAGAAGGTTTCACGTGTTGAATCGTTGGAGAAAAGAGTTGAGGATTTGAATTCTGAGGTGGCTTCTTTGAGAAGTAAATATGAAGAAAGTCAAAAGTCGCTCAAAGAAGCCCAAAAGAAAGTTGAAGACGAGCTTCGGGAATGGAAAGAGAAAGAATGTTGTTGGAAAACAAGAGAGAGTGAGCTGATTACGGAGGCGGCAACTCAGTGGGTGAACTCGTTTGAGCATTGCATGTTGCAGGTTTCCACTTTGCACCCGGACATTGATTTAAGTAGGTTAGGAGCTTTCAAGGAGATTCAGAATGGGCAGATAGTATCCCCCTCTGATTCAGAAGAGACTGGAAGTGAAGAAGACACCAGGAACTTTGAAGATGGTGGTCATGGCGACCAGAAATAA | 4827 | 0.4079 | MLSSSTTEYDVFISFRGEDTRKTFTGRLFNALKDRAIRVYMDRLLKGGDEIWPTLEKAIENSLMSIVVFSENFATSKWCLEELVKIVQWRDHHGQVVIPVFYRTEPRDVRSQRGSYEKAFAKYEREEKESNREKISKWRQALKEAANISGWHSTHYEDDDELARKVVKDVLEMRILKHPNIPTGLVGIKQIRKSIKFKMKQHGVIGIWGMPGIGKTTIAKMLFAKSFPHYDYVCYAENAKEYTPQRLLSELLREQISTDEAGFVNTLSRLSNRKVLIVLDNVKEYDQTLLEAVCEGYKSHSRDSKLIITTTDKDLLEKRVEWTFEVKQWTDSKSIELLSLKAFEERIPPKPFENLVNMVVKYAGGIPLALNVLGSYLRHKSIQFWENTLKKLQKHLHQGIDIAFRKIYDELDKPDKEIFLDIAFFFHGEKKDLVSSILEACNFSAINGIEVLHDKAMITTIPFKETIDMHGLLRELAYKVVHEENSKDPRKRSRLRDTQDICDVLKENKKSLDAIEGIILDLSQIKNMHLSPDAFKRMNKLRFLKFYIPSNQISGKMVLPKDLEPFSDKLRYFEWHQYPFVSLPPSFCAKLLVEIRMPHSHVKRLWEEKQELEHLEGIDLSECKELEELPDLSEAKRLKWVNLTGCETLTILPSSVFSSNTLVSLILDRCTNLQCVKAKGHLNSLQYISVKGCSNLTEFAVSSDLIKNLDLSYTKIEELDKSIGKLQKLESLNLEGSRVKHLPKVLSALKLLKELKHSYNGLEIDKQQLQDLFNSLHSLQILHLKDCKNSFEFPDNIIALSKLRELRLDGSYVTRLPATIKGLQELEILSLDNCIYLETLPEPPSSIKEFSVVNCSSLSVAHLNTLATKMVGKTKRISFNNSLTLSSGDILHSIMESIHSTMMSAVSNNATVRSYGTDVHSYNYNSVEVSLPGDTIPEQFAYKTEKSSSITIELPDSLSNSIGFIYSVVLSPRHGTKKHRAKIRCQYSFAGGTNSSWEDITISELNSDHLFIWYDPFHTDKILGQDKPSFHLEFSVVATDTGEVDDSIIVKECGVQIINESEWQIFSQEFDKMKKDIEEESSTQQLHPSHGSQDHSHVQTPPHDLKKERIDKQNNDTENQISKRQTEMNEQSSVDLQIEEKMESAPNENKTSGGKSHKENKPIKGKGNEEPPTESDVGLPLSIDSVKNNASVDMSKENYHDQPNAMGEVKHLEEKQEVHHSIHDMTADEPHIAKRKEAMDLKTSEGQEHTSNADQTGNLGQQNVDAKKLQELHKAKTTLLSQPINSSSIPSHGMKVAPKMTMKELRRHLKKVDKKAKLDEGDPARAIQAGNLAMETYHHSSGSKIKGKRVEDIHLNQVSTHNTSTSIAQMHDKITIPSLDDPQVALELLKHFDASAKRLQITEFVDNHVVYPYDHSITKDLDVSALCRWLQVQALRSVSVARYAEMKFEAAKREREEELRLAREENAKAEEALKKMEEKVSRVESLEKRVEDLNSEVASLRSKYEESQKSLKEAQKKVEDELREWKEKECCWKTRESELITEAATQWVNSFEHCMLQVSTLHPDIDLSRLGAFKEIQNGQIVSPSDSEETGSEEDTRNFEDGGHGDQK | 1608 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271895g00028 | 1608 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 5 | 175 | - | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1119 | 1133 | - | - | |
Stsc271895g00028 | 1608 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 175 | 422 | IPR027417 | - | |
Stsc271895g00028 | 1608 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 4 | 151 | IPR035897 | - | |
Stsc271895g00028 | 1608 | Coils | Coil | 1107 | 1127 | - | - | |
Stsc271895g00028 | 1608 | SMART | till_3 | 8 | 148 | IPR000157 | GO:0007165 | |
Stsc271895g00028 | 1608 | Gene3D | - | 176 | 322 | IPR027417 | - | |
Stsc271895g00028 | 1608 | Pfam | TIR domain | 9 | 173 | IPR000157 | GO:0007165 | |
Stsc271895g00028 | 1608 | SUPERFAMILY | L domain-like | 519 | 865 | - | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1134 | 1171 | - | - | |
Stsc271895g00028 | 1608 | Gene3D | - | 6 | 175 | IPR035897 | - | |
Stsc271895g00028 | 1608 | Coils | Coil | 752 | 772 | - | - | |
Stsc271895g00028 | 1608 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 9 | 699 | IPR044974 | GO:0006952 | |
Stsc271895g00028 | 1608 | Coils | Coil | 1448 | 1528 | - | - | |
Stsc271895g00028 | 1608 | Gene3D | - | 330 | 412 | IPR042197 | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1097 | 1118 | - | - | |
Stsc271895g00028 | 1608 | Gene3D | Ribonuclease Inhibitor | 474 | 703 | IPR032675 | - | |
Stsc271895g00028 | 1608 | Gene3D | Ribonuclease Inhibitor | 704 | 905 | IPR032675 | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1077 | 1181 | - | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1590 | 1608 | - | - | |
Stsc271895g00028 | 1608 | Pfam | NB-ARC domain | 198 | 411 | IPR002182 | GO:0043531 | |
Stsc271895g00028 | 1608 | Pfam | C-JID domain | 931 | 1062 | IPR045344 | - | |
Stsc271895g00028 | 1608 | PRINTS | Disease resistance protein signature | 363 | 377 | - | - | |
Stsc271895g00028 | 1608 | PRINTS | Disease resistance protein signature | 610 | 626 | - | - | |
Stsc271895g00028 | 1608 | PRINTS | Disease resistance protein signature | 204 | 219 | - | - | |
Stsc271895g00028 | 1608 | PRINTS | Disease resistance protein signature | 269 | 283 | - | - | |
Stsc271895g00028 | 1608 | MobiDBLite | consensus disorder prediction | 1578 | 1608 | - | - | |
Stsc271895g00028 | 1608 | ProSiteProfiles | TIR domain profile. | 7 | 174 | IPR000157 | GO:0007165 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271895g00028 | Stsc-Chr271895 | 157690 | 163962 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271895g00028 | 4 | 833 | WRKY Transcription Factor Family | AT4G12020 | 29.089 | 7.78e-76 | 277 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271895g00028 | - | - | aip:110266592 | 2429.82 |