Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00026 ATGTGTTGTTCTGCAAAAGAATACGATGTTTTTCTTAGTTTCAGAGGTGCAGACACACGCAACAACTTCACCATCCATCTCTTCAACGCTCTCAAAAACAAATCAATAAAAACGTACATGGACTCTCTTCTTGACAGAGGAGAAGATGTTTGGCCATCACTTGAGACAGCCATCGAGGACTCACACGTCTCAATCGTGGTTTTCTCCAAAGACTACGCTTCTTCCAAGTGGTGCTTGCAAGAACTGGTGAAGATTCTGCAGTGCAGAAAACTTTTTGGTCAGGTTGTGATACCTGTGTTCTATGGAACAGATCCGTCGATGATAAGGGGCCAGACTGGGAGTTTTGAACAATCATTTGCGAAACATGTACGAGGTCTGGGAGACAATGACATCAAAGTGAAGAAATGGAGAGATGCTCTCACTGAAGCAGCCCAAATTTCTGGATGGGACTCCCGAAATCTGGATGAGCCTCAACTCATAGAGAATATTGTGAATGATGTATTGCAAAAGCGATGCCTGCGGAGACCTATTGAGATAAATGACCTTGTTGGAACCGACCAAATCTGTAAGAACGTAGAAATTTTAATGAAAAAATACAAAGTCATTGGGATTTGGGGCATGCCCGGAATTGGCAAGACAACCATTGCTAATGTCTTGTTTGCCAAACTCTTCCCCCAATTTGACAAGGTTTGCTACGTAGCCAATGTAAAAGAATACTCACATGATAGACTCATCTCTAAGCTATTAAAAGAAGAAATCTCCATACCTAATGTTGTTGGATTCCAATATGGTCTAAAAAGGCTTGGTAGCAAGAAAGTTTTCATAGTACTTGATGATGTTGATAGTTTGGATCAAGTCAAATATTTCTGTAGAGAATACCGAGACCTAAGTGAAGATAGTAGACTCATCATAACAACAAGAGATAAGCATATTCTTAAAGATGAAGTTGATTGGATCCATGAGGTCAAGAAATGGAATGATCCACAATCACTACAACTCTTTTGCTTAGAAGCCTTCAATGAGATTCATCCTCCGGAGGGTTATGAGGTTCTATCCGCCAGTGCGGTAGAGTATGCTGGCGGAGTCCCATTAGCTTTAAAGGTTTTGAGTTCGAGTCTCAGATCAAAACCGATTGACTTCTGGAAAGGTACTTTGGAGAAACTGAAGAAGTATCCTAATGAGACTATTCAGAACTTGTATAAGATGAGCTATGATGGGTTAGATGAAGAAAATAAAAAGATGTTTCTTGAGATTGCATTTTTTCACAATGGAGAAGAAAAGGATAGTGTGACAAGCATACTAATGGCTTGTGGGCTTGAAGCAAGGTGTGGAATGGTGGTCCTTCAAGATAAAGCTTTCATATCTATTTCATATAACAATACAATAGAAATCCATGACTTGTTGCGAAAAATGGCGTTTGAAATAGTGCGTCGAGAAAGCAGTGAAGATCCTTCAAGACGTTGCAGATTGATGAGGGACACTGAAGAAATTTGTGCTATGCTCATAGATAACAAGGGTACAGATGCAATTGAAGGCATAATGTTAGATTTGTCACAAATTGGAGAAATGCAGTTGAGTGCTGATGCTTTTAGAAAGATGAATAAATTGAGATTTCTTAAATTATATAAGCCCTCAGATCAATTTGCTGGTAACATTAGTCTTCCTGAAGGGCTTGAATCATTTTCTGACAAACTAGTGTACCTTGAGTGGTATGGATACCCTTTGGACTCTCTTCCACTTAACTTTTCTGCTAAGTTCCTTGTCGAGATTCGCATGTCACACAGCTATGTCAAACAACTCTGGCAGGGGATTCAGGAAGTTGGCAACCTAAAGAGAATTGACTTGAGTGAATGCAAGAACTTAATCAAGCTTCCAGATTTGTCCAAGGCTAAAAGACTGAGATGGGTGAATCTCTCTGGCTGTGAGAGTTTGTGTGCTCTTCATTCATCGGTTTTATCCTCCGACACACTTGTAACTTTGATACTAGACAGGTGCACCAATTTGCAATATGTTAAAGGTGATAAGCACTTAAAATCTCTAGAAGATATCAGCGTCAATGGTTGCTCGAGTCTCGAGGAATTTGCAGTCTCATCCGATTTGATCGAAAGCTTGGATCTAAGCAACACAAGAATTGAAACTCTACACACATCAATTGGCCGTCTATGCAAGCTTGGAAGCCTCAATCTAGAAGGTTCGCCTGTTAAGCTTCTCCCAACTGAGTTATGCTTGACATCCCTTAAGGTTCTAAGGCTCTCCTATGGTGGACTAGTAATTGACAAGCAACAACTTCATGTTCTGTTTGATGGATTACGTTCTCTACAGATATTGCATCTCAAGGAATCTAGTAATCTGTTTGAATTCCCTGAGAATATTTGTGTCTTGTCAAAATTGCAGGAGTTAATACTTGATGGAAGCTCTGTGAAGAGCTTGCCTCCAAGCATTAAGCATCTTCAAAGGCTGGAAATTCTGTCCTTCAAGAGTTGCAAGAAGCTCCGGAGTTTGCCGGAGCTTCCACCGCTAATCCACGAGTTCTGCGCCGATGATTGCACCATGTTAAAGTCAGTATCAAACTTGAAGACATTTTCTAGGAAGATGGTGGGAAAGACGAAACACATCTCGTTCAAGAATAGCTTGAAATTGGAGGATGATTCATTGCAGTCTGCTATGAAAAGCCTCCATTTAACAATGATTAAAGCTGTATCTAACAATGTGAAGGTCAGAAAACACCGCGGCGGATATAATTATAACAGTGTGGAGGTTTGTTTACCAGGAAGTAAAGTTCCAAGAGAGTTCACATACAAAAAATCAGAGTCTTCATCCATTATCATTACCGAGCTTCCTGACTCTGAATTGTTAGGCTTTGTTTACTGTGTTGTTCTTTCACCGTCGGACGGAATGAAGAGGGAAGGCTCTAAGCTGCGGTGTCAATGCCAGTTGGTTGGAGGCCAGAAGGATACATGGCTGAACAGAGCCGTGAGTGAGTTGAACTCAGATCATGTCTATGTATGGTATGATCCACTCCATTGTGATAACATTCTGAGATTCCATCCACCAAAGGTTCGTTTTGAGTTTAGTGTTACAACTGATGAAGGTGAAGTCGATGGATCAATCCATATTAAAGAATGCGGTGTGCTCCTGATAAGTTTTTCAGTTGTGGAAAGTGTTTTACAAGAACTGGAGTTGCATTTGCCTGTTGATTTGGTTGAGGAAGAGAATGTTCTGGCCCCTGAGGAGAATCAAAGCTTGCGAGGACAGCGACAATGCATTGTTCATCCTGACATCGACATGGATCTTGACAGATCTAAAGGATTACTGAAAGAAAGAAAGAATGTGCTCTCACAACAAACTGAATCCACCTTACCTTCAAATATGAAGATGACTCGAAAATTTTCAAGTCGAGAGCTTCGGATCCACTTGAAGGATGTAGCAAAACAGGCAGAAGTTGAAGGCGATTTTGCAAGAGCTGCTCAGCTTACAGCTTTATCCATGGGATCTTCAGATGTTCTATGCAAAGAGAAAGGCAAAAGAGTAGTGGAATACAATCATATTCGTTCGGATTCAATTTTAACTCCAACTTCTCCCTTTAATGCAGAGATTCATGAACAAATTATCTTTCCTTTGGAGGATCCACAGGGATCTGTGGAGTTATTAAAAGACTTGGAAGCACAGGCTACTAGTCCAATAAGAGAGTTCTTGGATGATCATGTCCTAAATTTATATGATCATTCCCGAGTGAAAGGCCTTGGAGGTCCTGCACTTTGCCGTTGGCTTCAAGTTCAAGCAATTAATTCAGCCAGTGTTGGAAGATACGCTGAGCTTGAGTTCGAAGCTGCCTCAAGAAGCATAGCTGAGAAAGATGAAGAATTAAGACTTGCAAGAGAAGAGGCGGATAGGAAGCAAGAAAGTTTGAAAAGAATGGAGGATAGAGTGGAGGATCTAAACTCTGAGGTGGCTTCTTGGAGAAGAAAATATGAAGAAGCTCAAAAGGAACTTGAAGATGAGAAAAAATGGCGAGCTCTTTCAGCTGAGGAGTGGCATAGAAGGGAAAGTGAGTTGAAGACGGAGGTGGCAACCAACTGGGTTGCCTCGTTTGAAAATTGTAAGTTGCAGGTTCAAACTCTGTATCCTGACATTGATTTAAGTCGTCTTGGAGCTTTCAAGGAGATTCGGAATGGAGATATTGCATCCCCTTATGATTCTGAGGAGATTGAGAATGAAGAAGATCCAAAACCTTTGTTAAAACTCCAAGATAGTGATGGTCATGGGGATTCCTGTGAAAATATCTTTGAAGTTAATGAAGTTTGCATTGGGAGGTAA 4317 0.4079 MCCSAKEYDVFLSFRGADTRNNFTIHLFNALKNKSIKTYMDSLLDRGEDVWPSLETAIEDSHVSIVVFSKDYASSKWCLQELVKILQCRKLFGQVVIPVFYGTDPSMIRGQTGSFEQSFAKHVRGLGDNDIKVKKWRDALTEAAQISGWDSRNLDEPQLIENIVNDVLQKRCLRRPIEINDLVGTDQICKNVEILMKKYKVIGIWGMPGIGKTTIANVLFAKLFPQFDKVCYVANVKEYSHDRLISKLLKEEISIPNVVGFQYGLKRLGSKKVFIVLDDVDSLDQVKYFCREYRDLSEDSRLIITTRDKHILKDEVDWIHEVKKWNDPQSLQLFCLEAFNEIHPPEGYEVLSASAVEYAGGVPLALKVLSSSLRSKPIDFWKGTLEKLKKYPNETIQNLYKMSYDGLDEENKKMFLEIAFFHNGEEKDSVTSILMACGLEARCGMVVLQDKAFISISYNNTIEIHDLLRKMAFEIVRRESSEDPSRRCRLMRDTEEICAMLIDNKGTDAIEGIMLDLSQIGEMQLSADAFRKMNKLRFLKLYKPSDQFAGNISLPEGLESFSDKLVYLEWYGYPLDSLPLNFSAKFLVEIRMSHSYVKQLWQGIQEVGNLKRIDLSECKNLIKLPDLSKAKRLRWVNLSGCESLCALHSSVLSSDTLVTLILDRCTNLQYVKGDKHLKSLEDISVNGCSSLEEFAVSSDLIESLDLSNTRIETLHTSIGRLCKLGSLNLEGSPVKLLPTELCLTSLKVLRLSYGGLVIDKQQLHVLFDGLRSLQILHLKESSNLFEFPENICVLSKLQELILDGSSVKSLPPSIKHLQRLEILSFKSCKKLRSLPELPPLIHEFCADDCTMLKSVSNLKTFSRKMVGKTKHISFKNSLKLEDDSLQSAMKSLHLTMIKAVSNNVKVRKHRGGYNYNSVEVCLPGSKVPREFTYKKSESSSIIITELPDSELLGFVYCVVLSPSDGMKREGSKLRCQCQLVGGQKDTWLNRAVSELNSDHVYVWYDPLHCDNILRFHPPKVRFEFSVTTDEGEVDGSIHIKECGVLLISFSVVESVLQELELHLPVDLVEEENVLAPEENQSLRGQRQCIVHPDIDMDLDRSKGLLKERKNVLSQQTESTLPSNMKMTRKFSSRELRIHLKDVAKQAEVEGDFARAAQLTALSMGSSDVLCKEKGKRVVEYNHIRSDSILTPTSPFNAEIHEQIIFPLEDPQGSVELLKDLEAQATSPIREFLDDHVLNLYDHSRVKGLGGPALCRWLQVQAINSASVGRYAELEFEAASRSIAEKDEELRLAREEADRKQESLKRMEDRVEDLNSEVASWRRKYEEAQKELEDEKKWRALSAEEWHRRESELKTEVATNWVASFENCKLQVQTLYPDIDLSRLGAFKEIRNGDIASPYDSEEIENEEDPKPLLKLQDSDGHGDSCENIFEVNEVCIGR 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00026 1438 Pfam TIR domain 8 171 IPR000157 GO:0007165
Stsc271895g00026 1438 FunFam Disease resistance protein (TIR-NBS-LRR class) 4 172 - -
Stsc271895g00026 1438 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 149 IPR035897 -
Stsc271895g00026 1438 ProSiteProfiles TIR domain profile. 6 171 IPR000157 GO:0007165
Stsc271895g00026 1438 SUPERFAMILY L domain-like 514 838 - -
Stsc271895g00026 1438 PRINTS Disease resistance protein signature 605 621 - -
Stsc271895g00026 1438 PRINTS Disease resistance protein signature 201 216 - -
Stsc271895g00026 1438 PRINTS Disease resistance protein signature 267 281 - -
Stsc271895g00026 1438 PRINTS Disease resistance protein signature 359 373 - -
Stsc271895g00026 1438 MobiDBLite consensus disorder prediction 1407 1421 - -
Stsc271895g00026 1438 SUPERFAMILY "Winged helix" DNA-binding domain 395 480 IPR036390 -
Stsc271895g00026 1438 SMART AAA_5 198 323 IPR003593 GO:0016887
Stsc271895g00026 1438 MobiDBLite consensus disorder prediction 1396 1421 - -
Stsc271895g00026 1438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 697 IPR044974 GO:0006952
Stsc271895g00026 1438 SMART till_3 7 146 IPR000157 GO:0007165
Stsc271895g00026 1438 Gene3D - 168 320 IPR027417 -
Stsc271895g00026 1438 Coils Coil 1275 1337 - -
Stsc271895g00026 1438 Gene3D - 325 408 IPR042197 -
Stsc271895g00026 1438 Gene3D Ribonuclease Inhibitor 509 698 IPR032675 -
Stsc271895g00026 1438 Gene3D Ribonuclease Inhibitor 699 904 IPR032675 -
Stsc271895g00026 1438 Pfam NB-ARC domain 197 404 IPR002182 GO:0043531
Stsc271895g00026 1438 Gene3D - 4 167 IPR035897 -
Stsc271895g00026 1438 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00026 Stsc-Chr271895 147229 154029 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00026 4 825 WRKY Transcription Factor Family AT4G12020 30.542 4.85e-88 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00026 - - adu:127739622 1883.61