Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00023 ATGCCTAATGTTGCTATCAAGAAGTTCAGTGCAATAGATCAGAGCCGAATCGAGGTATTCATTAATAAGTTGGTTCTTCTAGCACACATGAGGCATAAGAATGTGGTCCCCATCTTGGGCTGTTGTTTAGAGAGTGAAGCTCCTTTGGTGGTTTATGAGTTTTTTAATAACAGTACCCTTTTTGACTACCTACACAAGAAAAACAGGTTCAAATTACCATGGGAAATTCGTCTACAGATAGCAATAGAGGCAGCTAAAGCTCTAGATTATTTGCACTCAGGTGTCACAATACCAATTATCCACTCAAATGTCTCAAGTGCCAACATTCTCCTTGATGACACTTTTACTGCCAAATTAATGTTTGATTTTGGGAATGTAAGTTTGAACTCGATGTATCCAGTATTTGGATTAAGTGTTGGTTATTTGGACCCGGAGTATTTTCTCATAGGCCAACATAGTGAGAAAAGTGACGTGTATAGTTTTGGTGTTGTGCTAGCCGAACTGATAACAGGGGTGAAACCAATATATGCGGAGAATCCAGGAGGGGGATTTACTAATCTTGCTAGGCAGCTCATCTTAGCCTTGGAAAATAATAGCTTGCATGATATACTAGAAACTGACATTGTGGATAAAGAAAATGAGGAGGAAATCATCCGAGTTGCTCTACTTGCAGCCAAGTGTTTGAGACTTAATGGAAAAGAAAGGCCTAGCATGGGAATGGTTGCAATGGAGTTGGAGAATATAAGAAAGAAGCATGAAAGCAGAGACAGTTCGGACCTCAGTTTGACCAAGACTCTACAATTGTTTGATGATACATCCAGCACTTTTGAGCATGGCAGCAGTAGTAGTAGCAGTAGCAGTGTCCAAAACAGTGGCTACGAATCATGTACCGATTCAATGTAG 903 0.402 MPNVAIKKFSAIDQSRIEVFINKLVLLAHMRHKNVVPILGCCLESEAPLVVYEFFNNSTLFDYLHKKNRFKLPWEIRLQIAIEAAKALDYLHSGVTIPIIHSNVSSANILLDDTFTAKLMFDFGNVSLNSMYPVFGLSVGYLDPEYFLIGQHSEKSDVYSFGVVLAELITGVKPIYAENPGGGFTNLARQLILALENNSLHDILETDIVDKENEEEIIRVALLAAKCLRLNGKERPSMGMVAMELENIRKKHESRDSSDLSLTKTLQLFDDTSSTFEHGSSSSSSSSVQNSGYESCTDSM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00023 300 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271895g00023 300 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 253 IPR045274 GO:0007166
Stsc271895g00023 300 PIRSF ILK 3 201 - -
Stsc271895g00023 300 PIRSF ILK 204 264 - -
Stsc271895g00023 300 Gene3D Phosphorylase Kinase; domain 1 1 54 - -
Stsc271895g00023 300 Gene3D Transferase(Phosphotransferase) domain 1 55 272 - -
Stsc271895g00023 300 SUPERFAMILY Protein kinase-like (PK-like) 4 275 IPR011009 -
Stsc271895g00023 300 MobiDBLite consensus disorder prediction 273 300 - -
Stsc271895g00023 300 Pfam Protein tyrosine and serine/threonine kinase 3 243 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00023 Stsc-Chr271895 132274 133397 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00023 4 251 Receptor kinase-like Gene Family AT3G25490 47.638 3.41e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc271895g00023 PK_Tyr_Ser-Thr 9.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00023 - - ahf:112777838 390.578