Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271895g00012 ATGTTAACACACGCGACTGCTAGGGTTTTCACTCGCACAACTGCAACTACTCTCTCTGCCAGCCGCTTCCCTCGTCTTCTTCTCAGAAACATCATGGGACACTCCAACGTTTGGAACTCTCACCCAAAGAACTATGGTCCTGGTTCTCGTACTTGTCGCGTGTGTGGCAACCCACACGGATTGATAAGGAAGTATGGCCTCATGTGCTGCAGGCAGTGCTTCCGCAGCAATGCCAAGGAAATCGGCTTCATTAAGTACCGCTGA 264 0.5114 MLTHATARVFTRTTATTLSASRFPRLLLRNIMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271895g00012 87 FunFam 40S ribosomal protein S29 32 87 - -
Stsc271895g00012 87 Pfam Ribosomal protein S14p/S29e 38 87 IPR001209 GO:0003735|GO:0005840|GO:0006412
Stsc271895g00012 87 PANTHER 40S RIBOSOMAL PROTEIN S29 32 87 IPR039744 GO:0003735|GO:0008270
Stsc271895g00012 87 Gene3D 30s Ribosomal Protein S14; Chain N 32 87 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271895g00012 Stsc-Chr271895 75245 77031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271895g00012 32 87 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.87e-35 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271895g00012 K02980 - gmx:100817876 131.339