Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271894g00026 ATGGCTGGTTGTTTGAGAGCTTCCTCTGCTGCTTGTTCTATTTTGATCCTTTTTGTTGTGTTTGGAGTAACTTATGCTGCTAAGGATATCTTGGTTGGAGGCAAGGTTGATGCATGGAAGGTTCCATCTTCAACCTCTGATTCCCTCAACAAATGGGCTGAGAGGGCTAGCAAAGAGGATTATGGGAATTGCAACACAACAAGCCCAATTAAGAAGTTCAATGACGGCAACACTAAGGTGGAGCTGGACCACCCTGGACCATTCTTCTTCATAAGTGGAGCAAAGGGTAACTGTGAGCAAGGTGAGAAGCTTCATGTGGTGGTGTTGACTCCAAGGGGTTCACCTGCACCTTCACATGCACCTGCTACTACTCCTTCACCTTCTTCAGGATTTGAGGAAGCTCCTACACTTTCACCTGCTGTTGCTCCTTCAACTGGTGGTGCCAATGCTTTGGAGTGTGGCATTCTTATGCCTCTTATAGGGGTTTTTGCCATGTGGGTTTTCTAA 507 0.4655 MAGCLRASSAACSILILFVVFGVTYAAKDILVGGKVDAWKVPSSTSDSLNKWAERASKEDYGNCNTTSPIKKFNDGNTKVELDHPGPFFFISGAKGNCEQGEKLHVVVLTPRGSPAPSHAPATTPSPSSGFEEAPTLSPAVAPSTGGANALECGILMPLIGVFAMWVF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271894g00026 168 Gene3D - 54 112 IPR008972 -
Stsc271894g00026 168 PANTHER BLUE COPPER PROTEIN 56 121 IPR039391 GO:0009055
Stsc271894g00026 168 MobiDBLite consensus disorder prediction 113 143 - -
Stsc271894g00026 168 Pfam Plastocyanin-like domain 56 101 IPR003245 GO:0009055
Stsc271894g00026 168 ProSiteProfiles Phytocyanin domain profile. 1 110 IPR003245 GO:0009055
Stsc271894g00026 168 MobiDBLite consensus disorder prediction 117 133 - -
Stsc271894g00026 168 SUPERFAMILY Cupredoxins 27 109 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271894g00026 Stsc-Chr271894 195580 196231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271894g00026 13 166 Phytocyanin Superfamily AT2G25060 37.288 1.31e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271894g00026 - - ahf:112697568 204.912