Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271894g00006 ATGATGGACTCCTACATACGCAGTGTGGGACTCCATCATACGTGGCACCTGAGATACTCCGTAGAAAAGGCAGATATATGGTCTTGCGCTTTGCTGGCAGGGTATCTACCCTTCCAACATGAGAATCTCATGTACTTGTATACCAAGCTACTTAAGGCCGAGTTCCAGTTTCCTCCTTGGTTCTCTCTTGAATCAAGGACGTTAATCTCGAATATACTAGTACCCGATCCACACATTCGAATTTCGATCTCTTCAATTATGAGTGCCCCTTGGTTCCTAGATGGCTTTTCATCAACTTCAACTTGTTCTTCTCCTCATCATCAACCATGGGAAAACAAACTAGCTTCACGAGTTCATCACCCTTTGTCGTCATCATCGCCCAAGTTCTTCAATGCCTTTGAGTTCATCTCAACCATGTCTTCAGGGTTCGATCTTTCGGGTTTGTTTGAGGACAAGAGAAGACCCAGTTCTATCTTCACTTCCAAGTGTTCTCCTTCGGTGATACTATCCAAAATCGATAGCATGGCAAAGGATTTAAGGTTTAAGATAGAAAAGGGGAAGGACTTCCAGGTGATGTTTCAAGCGACTGCCGAGGGGAGGAGCGGGAGGCTGATGGTTGCAGCCGAGGTGTTCGAGGTAGCAGGGGATGTGGCAGTGGTGGAATTCTCCAAGTTTTCCGGGGACACGTTGGAGTATGAGAAGCTTTGGGAGGAACAAGTTAGGCCAGCATTGAAAGATATTGTTTGGACATGGCAAGGTGAATATTATGAAGAATTTCCAAAACCTAGTTAG 792 0.4545 MMDSYIRSVGLHHTWHLRYSVEKADIWSCALLAGYLPFQHENLMYLYTKLLKAEFQFPPWFSLESRTLISNILVPDPHIRISISSIMSAPWFLDGFSSTSTCSSPHHQPWENKLASRVHHPLSSSSPKFFNAFEFISTMSSGFDLSGLFEDKRRPSSIFTSKCSPSVILSKIDSMAKDLRFKIEKGKDFQVMFQATAEGRSGRLMVAAEVFEVAGDVAVVEFSKFSGDTLEYEKLWEEQVRPALKDIVWTWQGEYYEEFPKPS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271894g00006 263 FunFam Non-specific serine/threonine protein kinase 125 249 - -
Stsc271894g00006 263 SUPERFAMILY Protein kinase-like (PK-like) 22 121 IPR011009 -
Stsc271894g00006 263 Gene3D Kinase associated domain 1, KA1 132 250 - -
Stsc271894g00006 263 CDD CIPK_C 131 245 - -
Stsc271894g00006 263 Gene3D Transferase(Phosphotransferase) domain 1 14 131 - -
Stsc271894g00006 263 ProSiteProfiles NAF domain profile. 125 150 IPR018451 GO:0007165
Stsc271894g00006 263 Pfam NAF domain 127 185 IPR004041 GO:0007165
Stsc271894g00006 263 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 19 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271894g00006 Stsc-Chr271894 52038 53695 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271894g00006 19 254 CBL-interacting serine-threonine protein kinases AT5G10930 51.210 7.43e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271894g00006 - - gmx:100817520 278.1