Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271893g00018 ATGGAATCTGGTGGGATTGATGAGAGCAATGCGAGGTTGTTGGAAAATGGAAGCAATGAAGGGAGTAGTATTGAGTCAAGGTGGGTGGATGGCAGTGAAGTGGATACTATGGAGGTTCCTGCATGGTCAAATGAGGGTAGAGAAAGAGAAGGGTATGGGTCAGCGAGGAGGAGGATTTTGAAGGGTCCCAAGAGATTGAATTCTTTGGATGTTGAAGTCATGGCCATTGCCAAGAGTCAAGATCAACACTCCAAGGATGCTTCACTTTGGCCCACTCTTGCATTAGCATTTCAGACTCTTGGTGTGGTATATGGGGACATGGGAACAAGTCCTCTGTATGTCTTTGCAGGTGTCTTTAGCAAGGTTCCGATCGAGTCGGAAGTTGATGTCTTAGGGGCCTTATCACTAGTAATGTACACAATAGCACTTATTCCATTGGCAAAGTATGTTTTTGTTGTTCTCAAAGCAAATGACAATGGAGAAGGAGGAACATTTGCATTATACTCATTGATTTGCAGATATGCTAATGTGAATATGCTTCCGAATCGTCAAACAGCTGATGAACATATCTCTAGTTTTAGGCTCAAACTCCCCACTCCGGAAATGAAAAGGGCTTTAAAAATAAAGGATACTTTGGAGAAGAGGTCATCTTTGAAAACCTTTTTGCTGTTGTTGGTTCTGCTGGGAACTTCCATGATTATTGGAGATGGTATTCTAACCCCAGCAATATCAGTCATGTCTGCCATAAGTGGGTTGCAAGGTGAAATACATGGATTTGGTACAAATTCAGTGGTTTTTGTTTCAATAATAGTCTTGGTGGCTTTGTTCAGTATACAACGGTTCGGAACTAGCAAAGTCGGCTTCATGTTTGCACCTATACTTGCTTTATGGTTCTTCTGTCTTGGTTCTATTGGAATCTATAATATTGTTAAGCATGATATTATGGTTCTGAGAGCAATTAATCCGGCTTTTATTTTTTACTTCTTTAAGAAGAACGGCAAAAAGGCATGGTCAGCTCTTGGCGGTTGTGTTCTTTGTATTACAGGGGCAGAAGCAATGTTTGCTGATCTTGGCCATTTTTCTGTGCGAGCGATACAGATTGCCTTTACTTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCATTTTTGCTGAAGAATCCTACATCATATGCAAGAGTATTCTATGATTCTGTTCCAGGAAGTCTTTTCTGGCCAGTGTTTGTGATAGCCACACTTGCAGCTATGATAGCTAGCCAAGCAATGATATCCGCGACATTTTCATGCGTAAAGCAATCTATGGCTTTAGGGTGCTTCCCTCGGCTCAAGATAATTCACACCTCGAGAAAGTTCATGGGTCAAATTTACATCCCTGTAGTTAACTGGTTTCTCATGGTCATGTGCATAGTTGTTGTCTCTATCTTCCGAAGCACTACCGATATTGCAAATGCTTATGGCATTGCTGAAGTTGGTGTCATGATAGTTAGCACTACCTTGGTGACACTAGTAATGCTTCTAATTTGGCAAACTAACTTGTTTTGGGCATTTTGTTTCCCAATTGCGTTTGGATCGGTGGAGCTCATTTACATGTCGTCCGTCCTATCGAAAATCTTTGAGGGCGGCTGGCTTCCGCTCGCCTTCGCCACCTTTTTCCTCTCGGTGATGTACACTTGGAACTACGGGAGTGTATTGAAGTATAGAAGTGAAGTCCAGGAGAAGATTTCATTAGACTTGATGCTTGAACTCGGGTCGAATCTTGGAACGGTAAGAGTGCCGGGAATTGGATTGCTATATAATGAGCTTGTCCAAGGCATTCCTTCAGTCTTCTTACAGTTCCTGCTGAGTCTTCCGGCCCTTCATTCGACCATAGTTTTCGTGTGCATCAAGTATGTCCCTATCCCAGTTGTACCTCAAGAGGAAAGGTTTCTATTCCGAAGAATTTGTCCGAAAGATTACCATATGTTCCGCTGCGTTGCGAGGTATGGCTACAAAGATGTAAGGAAGGAAGATCACCATGCATTCGAGCAGCTTCTCATCGAAAGTCTCGAGAAATTCTTGAGAAAAGAGGCTCAGGAAACTGCCTTGGAAAGCAGTAACTTAACCGAGGACATGGACAATGTATCGGCGAAATCGAAGGAGTATGATCACCCAGATAACATCAATGTAGCTGAAGAACTAAGGATTCCATTGATGCATGGTCAGAACTCGATTGATTACATGTCATTGGATGAAGATGGTCTTGAATATGAGCTTTCAGCACTTAGAGAAGCAAGTGCATCAGGGTGCACGTATCTTGTAGGACATGGTGACGTGAGAGCAAAGAAGAAGTCGTTGTTCTTGAAGAAATTGGTGATTAATTATTTCTATGCATTCCTTAGGAAGAATTGCAGAGGAGGCACTGCAAATATGAGAGTGCCTCATACCAATATCATTCAAGTGGGGATGACATATATGGTCTAA 2472 0.4248 MESGGIDESNARLLENGSNEGSSIESRWVDGSEVDTMEVPAWSNEGREREGYGSARRRILKGPKRLNSLDVEVMAIAKSQDQHSKDASLWPTLALAFQTLGVVYGDMGTSPLYVFAGVFSKVPIESEVDVLGALSLVMYTIALIPLAKYVFVVLKANDNGEGGTFALYSLICRYANVNMLPNRQTADEHISSFRLKLPTPEMKRALKIKDTLEKRSSLKTFLLLLVLLGTSMIIGDGILTPAISVMSAISGLQGEIHGFGTNSVVFVSIIVLVALFSIQRFGTSKVGFMFAPILALWFFCLGSIGIYNIVKHDIMVLRAINPAFIFYFFKKNGKKAWSALGGCVLCITGAEAMFADLGHFSVRAIQIAFTCVVFPCLLLAYMGQAAFLLKNPTSYARVFYDSVPGSLFWPVFVIATLAAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSRKFMGQIYIPVVNWFLMVMCIVVVSIFRSTTDIANAYGIAEVGVMIVSTTLVTLVMLLIWQTNLFWAFCFPIAFGSVELIYMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRSEVQEKISLDLMLELGSNLGTVRVPGIGLLYNELVQGIPSVFLQFLLSLPALHSTIVFVCIKYVPIPVVPQEERFLFRRICPKDYHMFRCVARYGYKDVRKEDHHAFEQLLIESLEKFLRKEAQETALESSNLTEDMDNVSAKSKEYDHPDNINVAEELRIPLMHGQNSIDYMSLDEDGLEYELSALREASASGCTYLVGHGDVRAKKKSLFLKKLVINYFYAFLRKNCRGGTANMRVPHTNIIQVGMTYMV 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271893g00018 823 Pfam K+ potassium transporter 96 669 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc271893g00018 823 MobiDBLite consensus disorder prediction 12 26 - -
Stsc271893g00018 823 MobiDBLite consensus disorder prediction 1 30 - -
Stsc271893g00018 823 NCBIfam potassium uptake protein 95 823 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc271893g00018 823 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 81 821 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271893g00018 Stsc-Chr271893 190404 194651 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271893g00018 14 823 Inorganic Solute Cotransporters AT1G60160 73.261 0.0 1224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271893g00018 K03549 - gmx:100814419 1294.64