Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271893g00009 ATGGATCTTGAAGGTGGAACTCATCGAAACTCAAAGATAGAGTCATGGAAGACGGTTCTGACTTTAGCATATCAGAGCCTGGGTGTTGTTTATGGAGATTTGAGCACTTCACCGTTATACGTATTTAGAAGCACTTTCTCTGATGAAGTTGGTGAAGCTGTGTCCGTGGATAAGATCTATGGAGTGTTATCTTTGGTGTTCTGGACCTTCACTTTGGTTCCTTTGGTGAAATATGTGTTCATAGTGCTTAAGGCTGATGATAATGGGGAAGGTGGGACCTTTGCACTTTACTCATTGCTGTGCCGCCATGCCAGGGTGAGTTCACTGCCAAATGTGCAGGTTGCAGATGAGGAACTCACTGAGTATAAGAAAGATGGTTATGGTGTGGCACCAGAGAGCAGCTTTGCATCAAGGCTTAAGTCAACTTTGGAGAAGCATAAGGTTCTTCAGAGGATTCTTCTTGTTCTTGCTTTGATTGGAACTTGCATGGTCATTGGTGATGGGGTCCTCACACCTGCTCTTTCTGTTTTCTCAGCTGTGTCAGGATTTGAGCTTTCAATGTCCCGGGAGCATCATAGATATGTAGAAGTTCCGGCTGCATGCATCATATTGATAGGCTTGTTTGCCCTTCAACACTACGGCACACACAGGGTTGGCTTCTTATTTGCTCCTATCGTGATCACGTGGCTTTTCTGCATCAGTACCATTGGTATATATAATATATTCCACTGGAACCCTCATGTATACAAAGCACTCTCTCCGTATTACGCATTCCAATTCTTGAGGAACTCTCAGAAAGGAGGTTGGATGGCCCTTGGTGGAATTTTGCTATGCATAACAGGATCAGAAGCGATGTTTGCTGATCTTGGACACTTCTCACAGTTATCAATCAAGATTGCCTTCACCTCCATAGTTTATCCATCGTTGATCCTTGCATATATGGGACAAGCTGCTTATTTATCTAGGAATCATGAAGTTCGGCAAGAGTATCACTTCGGATTTTATGTATCTGTACCAGAGAAATTAAGATGGCCTGTTCTGGTTATAGCCATCCTTGCTGCTGTTGTGGGAAGCCAAGCCATCATCACTGGAACTTTCTCGATTATCAAACAATGCTCCGCGTTAAGTTGCTTCCCTCGAGTCAAAGTGGTTCACACATCATCTAAAATTCATGGCCAGATATATATCCCCGAGATCAATTGGCTACTGATGCTCTTGTGTTTGGCCGTGACAATTGGTTTCAGAGACACAAAGCGTCTGGGTAATGCCTCAGGTTTGGCAGTTATTACGGTGATGCTGGTTACCACATGTTTGATGTCCCTGGTTATAGTTCTGTGCTGGCACCAGAATGTTCTTCTTGCGCTTGGGTTTGTTTTCATATTTGGCACCATCGAGGCGCTCTTCTTCTCGGCTTCTCTTGTCAAGTTCCTAGAAGGAGCATGGGTACCTATTGCACTGGCATTTGTATTTATGACTGTCATGTATGTTTGGCACTATNNNNNNNNNNGCACGCTCAAGAAGTATGAATTCGACGTGCAAAACAAGGTTTCCATCAACTGGCTAGTGGGTCTAGGTCCCAGCATAGGCATCGTACGAGTGCGCGGGGTTGGCCTCATACATACCGAGCTAGTGTCCGGAATCCCTGCAATCTTCTCTCACTTTGTAACCAACCTGCCAGCTTTTCACCAGGTAGTTGTTTTCCTCTGCATCAAGCATGTCCCAGTTCCTCACGTTAGACCGGAGGAACGGTTTCTAGTTGGTCGCGTAGGTCCAAGAGATTTCCGGCTCTACCGATGCATAGTGCGATATGGATACCGTGACGTCCACAAAGATGACATGGAGTTTGAGAACGATCTCATATGCAGCTTAGCCGAGTTTATAAAGACCGGAAGCGCCACATCCAACTCCACAAACGAGGAAACCGAAAGCGACGACAAAATGGCAGTTGTTGGAACATGCTCTGGCCATACCATGATGATGAAAGAGGACAACTCGGATAATGCCGTCGATAACAATGCCGATGACTTGGCCGGGACATCAGAGCTAAAGGAGATTAAGTCACCCGTGATCCAGCCGAAGAAGAAAAGGGTGAGGTTTTTCGTCCCGGAGAGCCCGAAAATCGACAGGGGAGTAATGGAAGAGTTGGAGGAGATAATGGAAGCTAGGGAAGCTGGGGTAGCATACATTATAGGGCAATCACACATGAGGGCGAAAGCAGGGTCTAGCATGGTGAAGAAATTTGGTATTAATGTTGTGTATGAATTCCTAAGGAGGAATAGTAGGTCATCATCACTTGTACTTAGTGTGCCACATCAATCTTCTTTAGAAGTAGGGATGATGTACCAAATTTAA 2352 0.4511 MDLEGGTHRNSKIESWKTVLTLAYQSLGVVYGDLSTSPLYVFRSTFSDEVGEAVSVDKIYGVLSLVFWTFTLVPLVKYVFIVLKADDNGEGGTFALYSLLCRHARVSSLPNVQVADEELTEYKKDGYGVAPESSFASRLKSTLEKHKVLQRILLVLALIGTCMVIGDGVLTPALSVFSAVSGFELSMSREHHRYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVITWLFCISTIGIYNIFHWNPHVYKALSPYYAFQFLRNSQKGGWMALGGILLCITGSEAMFADLGHFSQLSIKIAFTSIVYPSLILAYMGQAAYLSRNHEVRQEYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEINWLLMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFIFGTIEALFFSASLVKFLEGAWVPIALAFVFMTVMYVWHYXXXXTLKKYEFDVQNKVSINWLVGLGPSIGIVRVRGVGLIHTELVSGIPAIFSHFVTNLPAFHQVVVFLCIKHVPVPHVRPEERFLVGRVGPRDFRLYRCIVRYGYRDVHKDDMEFENDLICSLAEFIKTGSATSNSTNEETESDDKMAVVGTCSGHTMMMKEDNSDNAVDNNADDLAGTSELKEIKSPVIQPKKKRVRFFVPESPKIDRGVMEELEEIMEAREAGVAYIIGQSHMRAKAGSSMVKKFGINVVYEFLRRNSRSSSLVLSVPHQSSLEVGMMYQI 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271893g00009 783 NCBIfam potassium uptake protein 22 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc271893g00009 783 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 11 782 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc271893g00009 783 Pfam K+ potassium transporter 24 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271893g00009 Stsc-Chr271893 111624 116342 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271893g00009 1 783 Inorganic Solute Cotransporters AT1G70300 72.335 0.0 1180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271893g00009 K03549 - gmx:100793141 1275.38