Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271892g00019 ATGGCACCACCAACATTCTCTTTCTCTTCTCTCTTGACTCATTACCACCTCTTCTTCACTCTCTTAGCCTTCCTCTTATCATGCCTCATCTTCTTCCTCACTCACTCAAGAACCAAATCCAAGAAACTCAACCTTCCTCCAGGTCCCCCTGGCTGGCCTATCGTCGGCAACCTCTTCCAATTCGCCCGCTCCGGCAAGCCATTCTTCGACTACGTCAATGACCTCAGATCAATCTACGGTCCAATCTTCACTCTTCAAATGGGAACTAGGACCATGATCATTCTCTCCGATGCCAAGCTCGTCCACGAAGCCATGATCCAGAAAGGCGCCACCTACGCCTCCCGCCCGCCGGAGAATCCAACCAGGACGATCTTCAGCTCTAACAAGTTCACCGTCAACGCCGCCGTTTACGGACCGGTTTGGAAGTCGCTAAGGCGGAACATGGTTCAGAACATGCTGAGCTCCACCAGGCTCAGGGAGTTCCGAANNNNNNNNNNGAGGGACAAAGCCATGGAGAAGCTCATCAACCGCCTCAGAACCGAAGCAGAGAACAACAATGGCGTCGTCTTCGTCCGCAAAGACGCGAGGTTCGCGACGTTCTGCATCCTCGTCGCCATGTGTTTCGGACTCGACATGGACGAAAACAGAGTGGAGAAGATAGATCAAGTCATGAAAAACGTTCTCATAACCCTAAATCCACGAATCGACGATTACCTTCCGATCCTGAGTCTCTTCTTCTCGAAACAGAGGAAGAGAGCGTTTCAAGTTCGAAAGGAGCAAGAAGATTTCATAGTACCGTTAATTGAACAGAGAAGAAAAGCAATTGAAAATCCAGGTTCAGATGAAATCGCAACGACATTTTCTTACCTCGACACGCTGTTCGATCTGAAGGTTGAAGGGAGGAAATCGGGACCGTCGAACGGAGAATTGGTGTCGCTTTGCTCGGAGTTCCTGAACGGAGGAACGGACACGACGGCGACGGCGGTGGAGTGGGGAATAGCGCAGCTGATTGCGAATCCGGAAGTTCAAGAAAAGTTGTACGGAGAAATAAAGGAGAGTGTGGGGGAGAAGAGGGTGGATGAGAAGGATATTGAGAAGATGCCGTATTTGCATGCTGTGGTGAAAGAGCTTCTAAGGAAGCATCCTCCAACACACTTTGTGCTGACACATGCTGTTACAGAGCCTACTACTTTGGGTGGTTATGATATTCCACTTCATGCTAACGTTGAGGTTTACACTCCGGCCATTGGTGAGGACACAAGGATCTGGTCAAACCCTGAGAAGTTTGAGCCAGAGAGATTCATCTCAGGTGGTGAAGAAGCAGACATAACTGGAGTGACTGGAGTTAAGATGATGCCATTTGGTGTTGGGAGGAGGATATGCCCTGGCTTGGCCATGGGAACTGTTCACATTCATCTCATGCTTGCAAGAATGGTTCAAGAATTTCAATGGAGTGCTTATCCACCTGGCAAGAAGATGGATTTCACTGGCAAGTTGGAGTTCACTGTGGTCATGAAGGAACCTCTTAGAGCAATCATCAAGCCAAGACCATAA 1554 0.4891 MAPPTFSFSSLLTHYHLFFTLLAFLLSCLIFFLTHSRTKSKKLNLPPGPPGWPIVGNLFQFARSGKPFFDYVNDLRSIYGPIFTLQMGTRTMIILSDAKLVHEAMIQKGATYASRPPENPTRTIFSSNKFTVNAAVYGPVWKSLRRNMVQNMLSSTRLREFRXXXXRDKAMEKLINRLRTEAENNNGVVFVRKDARFATFCILVAMCFGLDMDENRVEKIDQVMKNVLITLNPRIDDYLPILSLFFSKQRKRAFQVRKEQEDFIVPLIEQRRKAIENPGSDEIATTFSYLDTLFDLKVEGRKSGPSNGELVSLCSEFLNGGTDTTATAVEWGIAQLIANPEVQEKLYGEIKESVGEKRVDEKDIEKMPYLHAVVKELLRKHPPTHFVLTHAVTEPTTLGGYDIPLHANVEVYTPAIGEDTRIWSNPEKFEPERFISGGEEADITGVTGVKMMPFGVGRRICPGLAMGTVHIHLMLARMVQEFQWSAYPPGKKMDFTGKLEFTVVMKEPLRAIIKPRP 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271892g00019 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Stsc271892g00019 517 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 22 508 - -
Stsc271892g00019 517 SUPERFAMILY Cytochrome P450 46 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 FunFam Cytochrome P450 family protein 39 517 - -
Stsc271892g00019 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 Pfam Cytochrome P450 46 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 Gene3D Cytochrome P450 38 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc271892g00019 517 CDD CYP77_89 78 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271892g00019 Stsc-Chr271892 141308 144113 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271892g00019 10 516 Cytochrome P450 AT3G10570 66.862 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271892g00019 K21995 - gmx:100793522 828.935