Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271887g00008 ATGGGCTCTGAAGAGGATACTTCTGTCTATAGCCCTTTCCTTGACTTAGACACTGAGAGTGATCCACCCCGGTTACCTCCTTCCTTGCCTCAATGGATGTGGTCTTCAAACGTGGCAATATATTCAAACCAGGCAAACAAAATTCATATGTTAGATGATGAAAGGCCTCCTTGGGGATGGAGTGATCAGCCCACTGAAAACAACAGGTCGTTCTCTGTTTCAAAGCTTTTTTTACTCCTGGAGGTACCCTTGGCAATTCCTAGACAGCTTACAATTCCAATGGTCAATGATGAAGTCTGGCATAAGCCATATGCTGTGGCCAGTGCTACATTGGCTCCCATTCTCCTAGCCTTCTTGTGGAGCACGCAAGATAGTGTGGGTTCTTTGGGTATAATACTTTTTTATTGTGTTAGTGTTGCAGTTGGATGCACCCTTGGTATTCTTGCATATAAATATACCATGCCTGATCATCCACCACGTAGGTATCTACTTCCTTGGGTTCTTGGAGGATTCTTCATGAGCATAGTGTGGTTCTACATTATTGCAAACGAGCTTGTGGCTCTATTGGTAGCATTTGGTATAATATTCGGAATTAATCCATCCATCCTTGGATTAACCGTATTAGCGTGGGGAAATTCTATGGGTGATTTGATGTCAAATGTTGCATTAGCAATGGATGGAGAAGACGGAGTTCAGATAGCCGTATCTGGGTGCTATGCAGGTCCTATGTTCAACACACTTATTGGTTTGGGGATCTCGTTGCTTCTTGGGGCTTGGAAAACAAAACCTACATTGTTCGTGGTGCCGGAAGATAGTAGCTTATTTTACACACTGGGATTTCTTATCACTGGACTGCTATGGGCGCTTGTTGTTTTACCTCGCAACAATATGCATCCTAATCGGGTATTAGGAATTGGTCTCATTGGCCTTTATTTGGTGTTCCTTTCGTTTAGGGTGTGCACTTCCACGGGCCTCATAGAAGTTGCTGGTTCAAGTTGA 999 0.4374 MGSEEDTSVYSPFLDLDTESDPPRLPPSLPQWMWSSNVAIYSNQANKIHMLDDERPPWGWSDQPTENNRSFSVSKLFLLLEVPLAIPRQLTIPMVNDEVWHKPYAVASATLAPILLAFLWSTQDSVGSLGIILFYCVSVAVGCTLGILAYKYTMPDHPPRRYLLPWVLGGFFMSIVWFYIIANELVALLVAFGIIFGINPSILGLTVLAWGNSMGDLMSNVALAMDGEDGVQIAVSGCYAGPMFNTLIGLGISLLLGAWKTKPTLFVVPEDSSLFYTLGFLITGLLWALVVLPRNNMHPNRVLGIGLIGLYLVFLSFRVCTSTGLIEVAGSS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271887g00008 332 Pfam Sodium/calcium exchanger protein 167 318 IPR004837 GO:0016020|GO:0055085
Stsc271887g00008 332 FunFam Cation/calcium exchanger 5 104 320 - -
Stsc271887g00008 332 Gene3D - 73 320 IPR044880 -
Stsc271887g00008 332 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 28 327 - -
Stsc271887g00008 332 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271887g00008 Stsc-Chr271887 72905 74386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271887g00008 16 327 Antiporters AT5G17860 44.089 2.95e-86 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271887g00008 K13754 - gmx:100796101 551.977