Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271885g00015 ATGCCAATCATACATAGAGACGTCAAAACTACCAATATTCTACTTGATGCTGATCTCACGGCAAAGATTTCTGATTTTGGTGCTTCAAAGATTGTTCCTCTTGATCATACTGAATTAACCACTTTGGTGCAGGGGACACTAGGGTATCTTGATCCTGAATACATGCACACAAGTCAGTTAACTGAGAAAAGTGATGTTTATAGTTTTGGAGTCGTCTTAGCAGAGCTGCTCACCGGAATTAAGGCAATCTCTTTTGCTGATTCGGAGGCTAGAAACCTTGCAGCATACTTTGTTTCTTCAATGGAAGAAGGGCAGTTACTTGAGATTGTGGACAAACATGTCATAAATGAGGCAAAGGTGGAGCATCTTGTGGAATTTGCCAGTGTTGCAAAACAGTGTTTGAGAGTGAAGAGGGAAGAAAGGCCTACCATGAAAGAAGTTGCATCAGAACTTGAGGGGATTAGACTAGTAGTTAGAGAGAAAGATCGATGGGAAAGTGACAAATCATCCTCTGGAGTTACTAAAAGCTTGTTAGAAGCACCATCATCCTCTGTGTTGGATGTTGAAAGTTCTAAGTTTGATAGCATAAGTGGTTATTATGTCTCTGGGTGGTGGAAGATGATTAATTAG 630 0.4048 MPIIHRDVKTTNILLDADLTAKISDFGASKIVPLDHTELTTLVQGTLGYLDPEYMHTSQLTEKSDVYSFGVVLAELLTGIKAISFADSEARNLAAYFVSSMEEGQLLEIVDKHVINEAKVEHLVEFASVAKQCLRVKREERPTMKEVASELEGIRLVVREKDRWESDKSSSGVTKSLLEAPSSSVLDVESSKFDSISGYYVSGWWKMIN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271885g00015 209 ProSiteProfiles Protein kinase domain profile. 1 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271885g00015 209 Gene3D Transferase(Phosphotransferase) domain 1 1 176 - -
Stsc271885g00015 209 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 161 IPR045274 GO:0007166
Stsc271885g00015 209 Pfam Protein kinase domain 3 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc271885g00015 209 SUPERFAMILY Protein kinase-like (PK-like) 2 163 IPR011009 -
Stsc271885g00015 209 ProSitePatterns Serine/Threonine protein kinases active-site signature. 3 15 IPR008271 GO:0004672|GO:0006468
Stsc271885g00015 209 FunFam Wall-associated receptor kinase 2 1 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271885g00015 Stsc-Chr271885 115361 115990 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271885g00015 1 164 Receptor kinase-like Gene Family AT1G21240 58.182 7.15e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Stsc271885g00015 Pkinase 5.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271885g00015 - - ahf:112706010 285.419