Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc271885g00006 | ATGGCTGTGGAATACTCACCAAAGCTAATGCTTCCACTGCTACTAACACTTGTTGTTGTTGCAGGTCTCCATTATTGTGAAGCTGGCCGCAATAAATGCACACAAAGATGCGGGAAAGTCGACATTCCGTTCCCGTTTGGGACCACAATGGAGTGCTCCCTCGAACCCAAATTCCTCGTCAGATGCACCAACAACAATAGTGACCCAATCTTGCAAGACAATGACCGCCCTCTGAGAAGCATCTCCCTCGACCAAGGCTTACTCCGCGTTTCCTTGCCTGCAGCCAAAGACTGCTACACAGGCACGCTGAAGAAATTCAAAAATATTGAATCCATCGATTGGCTTTACGATTTTGGAAGTTATAGCATGTCATCGAGCCAAAACGAGTTCACTACTATTGGCTGCGACACACTGGGAATAGTGGTGGGGTATCCCTATTCAGATTCATTCTTTGATAAACCCTATGCCAAAACATGCTTATCCTACTGCGAGAAACCCGGTGATGCAACTACTGGAACCTGCGCTGGCACGGGTTGTTGCCATGTTGATGTACCAGGTTCCGAGTTCAAACAAGGCTTATCATTCATCTCTTATACTTTTGAAAATTCTCTACTCAACAACAGTGATAAGATTGAATTCAGTCCCTGTGGTTATGCCTTTGTGGCGGAGAAAGAATACTACAAATTTATGGCCGACGATCTGATAAGCAACAGGTTGAAGAACATTACAGTTCCCGTCGTGCTGGATTGGAGTGTAGGGAACCTTACATGTGAAGAAGCGAAGAAGAACAATTCCACCTATGCGTGTAAAGGGATGAACGTTGTCTGTTACCCTGCAAGGAACCGTCCTGGTTATCTTTGCAACTGCACAACTGGTTTTCAGGGTAACCCTTATCTCCCTCAAGGTTGTACAGATATTAATGAGTGCCTTGGAAGCCATGATTGCGTCAAGGGAACAAGATGCCACAACGACCCACCAGGGAACTACACATGCGAGTGTCCAAAGGGGTTGATAGGAGATGGAAGAAATAATGGAACAAAATGCCAAACTCCCAAACCCGCCACTCGGAACATACTCATAATTGCATTGATTGTCAGTTTAAGCATCTTAGCACTATTTGTGGTGGGCTCTAATGCCTATTGCGGATTGAAAAAAAGAAAGCTCAACAAACTAAAAGAACAGTTTTTTCAACAAAATGGTGGTCTACTGTTGCAACAAAAAATTGCCAAACATAGAGGTTCAATTCAAACAGCCAAAATCTTTAGCATAAAAGAGCTAAAGAAGGCCACCAACAACTTTGATGAAGACAAGATCTTAGGCCGGGGAGGTCAAGGAATAGTTTACAAAGGAGTCTTACAAGACGATACAATTGTGGCAATCAAGAAGTCCAAAATCAGTGATCAAAGACAGATTGAACAATTCATCAATGAAGTGATTATACTTTCCCAAATCAACCATACAAATGTGGTTAAACTCTTAGGGTGTTGCTTAGAGACACAAGTCCCGTTGCTTGTTTATGAATTCATTCAAGGTGGTACTCTTTATGATCATCTTCATGCTCAGCGCCAATCTCTAAGGCTTAATTGGAAAGCAAGATTGAGAATAGCAGCAGAGACTGCTGGTGCCTTGGCATACCTGCACTCTGCAACTTGTCCACCCATCATACATAGAGATGTGAAGACTACTAACATACTTCTTGATCATAATCTCAAGGCAAAGGTTTCTGATTTCGGAGCTTCAAAGATTGTTCCTCTTGATAATACTGAATTATCCACCTTGGTGAAAGGAACTCTGGGGTATCTTGATCCGGAATACTTCCACACAAGCTACTTAACAGAAAAGAGTGATGTTTATAGCTTTGGAGTCGTTCTAGCAGAGCTGCTAACGGGACGAAAAGCACTTTGTTTTGAGCTGCCTGAGAATGATAGAAACCTTGCAATGTATTTCGTTTCTTCAATGAATCATGGTCGTTTACATGACATTATGGACAAAGCCATAATTGAAGAGGCAAAGCCTGAGCAACTAATGGAATTTGCGAATATGTCAAAACGATGCTTAAGGGTGAAGGGAGAAGAAAGGCCTACCATGAAAGAAGTGGCAGCTGAACTTGAGGGACTCAGAATAATGGAAAAGAACATGTGGGAAAGTGTAAGATCGTCTTTGGAAGAGACTAAAATTTTGCTCAATGCATCATCATCATCATCTTCCTCCGCTTTTTACAGTGAAAGCATAGGTCAGATTACTGTTTCATTAGGTGGAAGGTGA | 2265 | 0.4243 | MAVEYSPKLMLPLLLTLVVVAGLHYCEAGRNKCTQRCGKVDIPFPFGTTMECSLEPKFLVRCTNNNSDPILQDNDRPLRSISLDQGLLRVSLPAAKDCYTGTLKKFKNIESIDWLYDFGSYSMSSSQNEFTTIGCDTLGIVVGYPYSDSFFDKPYAKTCLSYCEKPGDATTGTCAGTGCCHVDVPGSEFKQGLSFISYTFENSLLNNSDKIEFSPCGYAFVAEKEYYKFMADDLISNRLKNITVPVVLDWSVGNLTCEEAKKNNSTYACKGMNVVCYPARNRPGYLCNCTTGFQGNPYLPQGCTDINECLGSHDCVKGTRCHNDPPGNYTCECPKGLIGDGRNNGTKCQTPKPATRNILIIALIVSLSILALFVVGSNAYCGLKKRKLNKLKEQFFQQNGGLLLQQKIAKHRGSIQTAKIFSIKELKKATNNFDEDKILGRGGQGIVYKGVLQDDTIVAIKKSKISDQRQIEQFINEVIILSQINHTNVVKLLGCCLETQVPLLVYEFIQGGTLYDHLHAQRQSLRLNWKARLRIAAETAGALAYLHSATCPPIIHRDVKTTNILLDHNLKAKVSDFGASKIVPLDNTELSTLVKGTLGYLDPEYFHTSYLTEKSDVYSFGVVLAELLTGRKALCFELPENDRNLAMYFVSSMNHGRLHDIMDKAIIEEAKPEQLMEFANMSKRCLRVKGEERPTMKEVAAELEGLRIMEKNMWESVRSSLEETKILLNASSSSSSSAFYSESIGQITVSLGGR | 754 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc271885g00006 | 754 | PANTHER | WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 | 30 | 712 | IPR045274 | GO:0007166 | |
Stsc271885g00006 | 754 | Pfam | Protein kinase domain | 434 | 700 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271885g00006 | 754 | ProSiteProfiles | EGF-like domain profile. | 305 | 349 | IPR000742 | - | |
Stsc271885g00006 | 754 | SMART | egfca_6 | 305 | 349 | IPR001881 | GO:0005509 | |
Stsc271885g00006 | 754 | CDD | EGF_CA | 305 | 340 | - | - | |
Stsc271885g00006 | 754 | CDD | STKc_IRAK | 439 | 706 | - | - | |
Stsc271885g00006 | 754 | Pfam | Wall-associated receptor kinase galacturonan-binding | 33 | 90 | IPR025287 | GO:0030247 | |
Stsc271885g00006 | 754 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 554 | 566 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc271885g00006 | 754 | SUPERFAMILY | EGF/Laminin | 303 | 349 | - | - | |
Stsc271885g00006 | 754 | FunFam | Fibrillin 2 | 300 | 345 | - | - | |
Stsc271885g00006 | 754 | Gene3D | Transferase(Phosphotransferase) domain 1 | 509 | 728 | - | - | |
Stsc271885g00006 | 754 | SUPERFAMILY | Protein kinase-like (PK-like) | 417 | 711 | IPR011009 | - | |
Stsc271885g00006 | 754 | FunFam | Wall-associated receptor kinase 2 | 509 | 726 | - | - | |
Stsc271885g00006 | 754 | ProSiteProfiles | Protein kinase domain profile. | 433 | 706 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271885g00006 | 754 | SMART | serkin_6 | 433 | 709 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc271885g00006 | 754 | Gene3D | Phosphorylase Kinase; domain 1 | 407 | 508 | - | - | |
Stsc271885g00006 | 754 | Gene3D | Laminin | 256 | 348 | - | - | |
Stsc271885g00006 | 754 | SMART | egf_5 | 256 | 304 | IPR000742 | - | |
Stsc271885g00006 | 754 | SMART | egf_5 | 308 | 349 | IPR000742 | - | |
Stsc271885g00006 | 754 | FunFam | Wall-associated receptor kinase 2 | 403 | 508 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc271885g00006 | Stsc-Chr271885 | 26511 | 32057 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc271885g00006 | 19 | 749 | Receptor kinase-like Gene Family | AT1G21250 | 43.658 | 0.0 | 557 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_WAK | Stsc271885g00006 | Pkinase | 2.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc271885g00006 | - | - | ahf:112763858 | 975.311 |