Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271884g00023 ATGGGAAGAGCCTTACTCTCTGCTTTCCTTCATGATTTGTTGGACAACCTTCTTCTCTACCTCACTTCTCAAACCAAATCACATAGATATCTGCGCAAGATCAAGGAAAAGTTGGTGATACTTGATGGTCTTGTTGATGATGCAGAACAGGTGCAGTTTTCTGAAGGAGACAAAGCTCAGCAAGTGAAGGTGTGGCTGAATGAACTGCAGCATCTTGTTTACCATTTGGAGGAGCTTCTGCGGCAATGGCAGCAGGTCAACGCCACCGCCACTACCAAGTCTTTGCTTCTGCAACTAAATGTCTTCTCAACAGCAAAGAGGCCAGACATGGATATCAAGGTTCAAATCCGTGACACCCTTGCGAGCTTGGAAGCTCTTGTGAGAAAGAAGAATGATCTTGGTCTAACTGGGAGTGCTACAACTTTGAGGGAGTCTCTGCAGGGATTGCCTTCATCTTCTGATGTGGTGCATTCTTATTTTTATGGAAAATATCCCAAAGATTGTTTCTATGGAAGAGATGAAGAGGAGATGTCTATATTGGAAATCATGTTATCAAACAGTGAAATTGAAAGTGAAAGTGAAGAATATGTCAAGGTGATCAACATAGTGGGAAAATCCGGGGCAGGAAAAACTGCTTTGGCTGATGTTATCTACTTAAACCACGACGTGAGGGAGTCTTTTGAGCCTAGAGCTCGGGTCTCTATGCCCTCAGAAGCCAACTTCAAAGTCATGGCAAAGAAGATACTGGAGGCAGTCACAGAGCAGTTTTGTCCTGATAATGATTTCAGTGTGTTGAGGAAGAGATTGAAGAGAACCTTTGCTGGGAAGAAATTTCTGCTAGTGTTGGATGGCATCAAGATTGAAGATAGTTTATATGACTGGAACATGTTGATTGATTCCTTGGAATCTGCAGCAAGAGGAAGTGTCGTAATCCTAATATCCACTCCCTGTGATGATCCAAACCTGTTTCTGCCACCTGCTACTCGTACCGTGCATCTTGATTCGCTGTCGACGGAGAGTGCCTGGGGAATCTTTTTGGGGCATGCTTCTTCTAGGCAGATGGATGTTACAGAACATGAAGAACTTGCAGCTGCTTGCAAAGAGATTGTTAACAAATTGGGAAACCTTCCTTTGGCTGCAAAAATGGTAGGGAGCCTCTTCCAAGATAAGCTACATCTCGATCAATGGTTTGAGATACTGAGGAGCAAATTTCTGCATGCAGGTGAAGTGAATATCCCTATTCCTTCCTTCCTAGTACTCTGCTACCTTGATCTCCCAGCACAGATTAAACGGTGCTTTGCTTATTTGTCCTTGTTTCCAAAGGGCTACCAATTCAAGAAGAATGAGGTGGTCCTGTTATGGATGGCTGAAGGCTTTCTAAAGGAAACCAATGGCAAAAGCATGGAAGACATTGGTGATGAGTACTTTGGTTATCTAATCATGAGGTCTTTCTTAGAGCCTTATGGTTCTGGTGTTAGTTTTACAATGCATAATTTGATTCATGACTTGGCTACCTATGTGTTTGGAGAATCATACAAGCACCATTTGTCCTACTCAGGAAACACTCGGGATTTCGGATTGTCATTTCTTCTCAAACATGTAAAGTCTTTGAGAACCATCTTGCCTATATCATTGCAATTTGAACGCGCTCCTAGGCGCGTCGACCTGATGCTTAAGGTTATGATGTTGAATCCAGATGTTCTTCGGGTTTTCTCTTTATCACACTATGGTATCACTAACTTGCCTGCTTCAATTGGAAAACACATCCATCTGTGTTACCTTGACCTTTCCAACACTGCATTGCAGACACTACCAGATTCCATTTGTGATCTGCATAATTTGCAGACACTATTGTTGACAAACTGCACTGAACTCACAAGTTTACCACAGAGAATATGTGATTTGATAAACTTGCGTTACCTTGATATCAGAGGTAGCAGTGTGCAAGAGATGCCTTGGGAAATGCATAAATTGACAAGTTTGAGAACACTGAGAGACTTCATTGTTTCTGCTAACAGTCCAAGATTAAGAGACTTGGCAGGGCTCTCCAATCTCAAAACACTGTCTATTTCAAAGTTGCAGAATGTGGCTAGTGCTGAGAATGCTTCAGATTGCAAACTGATAGAGATGAAGAGCCTTGATAACCTTATTCTTCAATGGGACAATGGCATTGATGGCTATGAGGAGGATGAAATAGAAGTTCTTGAGGATCTAAAACCGCACAGAGACTTGGAAAGACTAAGAATCGAATACTTCAATGGTGCACGATTCTCAAACTGGTTGGGGGATCCTTCTTACCAAGCTTTACAGTCAGTAACTCTCCGTCATTGTGGAAATTGCACTTCTTTGCCAACATTAGGCCTGCTGCCATTGCTTAAAGACCTCTTCATTGAAGGGTTCACCAAAGTAAGTTCCATAGGCCTTGAATTTTATGGAGAGATGACTACTTCACATATGCCATTTCAATCTTTAGAGAGTTTGCAATTTTGTGATATGTTGGAATGGAGAAAATGGAACATACCAGAAGGTATTGAGTTTCCATGTCTCATTAAGCTATGTATAATACACTGTCCCAAGCTAGTGAAAGGTTTGCCTAAGCAACTTGATTCTTTAAAGAAGTTGGAGATCTTCAGATGCTATGACCTTATGGCTTCACTTCCAAAAGTTCCCAACACATGTGAATTGTTGGTACAAGAAAGCAACGAAACTCTGATGAGAAATGCTGCTAAAAGCCCCTCACAAGCATCTTCACGCCGGGTTTCGATCTCAGAAGAACTTGACATCACCCGAAAATCCTATTCTCGCTTTCTAGACAGTCACATTGTAAGCGACATTGAAGAAACTCCTCACGAGGCAAGGATGGAAACTGATTCCGCACGAAGCAGATCATCATCACTTGATTCTTCATCTTCATATACACCACCAGGGTCTCCAATTTCTACTGCTGATATTCCAACCACTGCACAAGAAGCTGTCCTTCCTCTTAGTGATGCCACTACCACTGTCAAGGAAGATACATTTTCGAAAGAAGATTTAGATGATCCAAGATCATCCTTTGAGATACTCAAGGTTTCAACGGTGTTTCAATTAAAGTCATTGCCACAAAAGTTGCACACTCTAAAAATTGTAGGGTGTGAATCCTTAGAGGCCCTACCTGATGATTTACTGGGAAGAATAACTACTCTTAGGGAGTTGTATCTGGTAAGTTGTTCTTCTCTTAAATCCCTACCTTCCCTTGGTTTTGTGGCAACACTTTACATACGTAACTGCAGGAACTTGGAAGATCTATCATCTTTAGAATCAAAAAAGCAGCTTGACTTTCTTCAACACTTGTTCATAGGGAGTAGCTGTGATTCTCTCAAGACCTTGAACTTAGATTTGTTCCTTGAACTCAAAATTATCTGTATATGGGATTGTCCTAATCTTCAATCAGTTAATTTTACCAGAGAGTTTAAAGGTGATCTTGCATCACTTGAATCTCTAGAGATTAGAGATTGCCCAAGATTGATATCTTTCCCAGAAGGAGGACTACATGCTCCAAATCTAGAATCCATATTCCTTTCCAATTGCAAGAGTCTTAACAAATTGCCTGATGCTATGAACTCTCTCACATCTCTCAAGACATTGTTTTTACACAGATGTCCAGAGATTGAATCTTTTCCACTTGGGGGTCTGCCTTTGAGTTTAATTCTACTCTCTATATCTTATTGTGATAAACTTACACCACAAAAGAGTTGGAGGTTAGATACTCTTGAGTCTCTCAACCGTTTGGAGCTTGAAGGTGGATGCATGGACATGGATTCATTTCCAGAGGACAAGCTGCTTCCTCCCAACATAAACTCCCTACGCATAAGCACACTGAAGAGTCTCAAGAAGCTACACTACAGGGGTTTCCAGCACCTGAATGCTCTTCAAACACTTGAAATTCATTGTTGTGACATGCTTGGATCCTTACCTGATGAAGGGCTTCCTTCATCCCTAAATCAACTTTGTGTTGAACAATGCTCATTGTTGACTCCAAGGCTTAAACCCAAGAGAGGGAAGGAATGGCACAAGCAACTACACTTGCACCGTTGTTGTGACTCTCTAGTCTCGTTTCCATTGTCCCTCTTCACCAATCTTGAAGATCTTCAGATACAAGACTGCATCATTCTTGGTGTGATTTCATCTGCTCAAAATAGTCTCACGTATCTTCGGAAACTGAAGGACTGCTCCAAAGGAATGTCATCACTTATGTCTCTTCACATCAGTGGACTTCCTAGTCTCACCTCTCTAGAGCACACTGGAATTCAGTACGTGGCATCTCTCAAGATTATCAAGAATAAAGATTGTAATAAGCTTGCATCTCTAGCTTTAGAAAGACTTGCTCATTCCCTTTCTCATCTTACCATCAGAGCATGTCCATTATTAAAAGTGCATTGTGAGAATGATACTGGGGAATACTGGAGCCTGGTTTCTCACATACCCTACAGAGTCATTGAAGACTAG 4488 0.4153 MGRALLSAFLHDLLDNLLLYLTSQTKSHRYLRKIKEKLVILDGLVDDAEQVQFSEGDKAQQVKVWLNELQHLVYHLEELLRQWQQVNATATTKSLLLQLNVFSTAKRPDMDIKVQIRDTLASLEALVRKKNDLGLTGSATTLRESLQGLPSSSDVVHSYFYGKYPKDCFYGRDEEEMSILEIMLSNSEIESESEEYVKVINIVGKSGAGKTALADVIYLNHDVRESFEPRARVSMPSEANFKVMAKKILEAVTEQFCPDNDFSVLRKRLKRTFAGKKFLLVLDGIKIEDSLYDWNMLIDSLESAARGSVVILISTPCDDPNLFLPPATRTVHLDSLSTESAWGIFLGHASSRQMDVTEHEELAAACKEIVNKLGNLPLAAKMVGSLFQDKLHLDQWFEILRSKFLHAGEVNIPIPSFLVLCYLDLPAQIKRCFAYLSLFPKGYQFKKNEVVLLWMAEGFLKETNGKSMEDIGDEYFGYLIMRSFLEPYGSGVSFTMHNLIHDLATYVFGESYKHHLSYSGNTRDFGLSFLLKHVKSLRTILPISLQFERAPRRVDLMLKVMMLNPDVLRVFSLSHYGITNLPASIGKHIHLCYLDLSNTALQTLPDSICDLHNLQTLLLTNCTELTSLPQRICDLINLRYLDIRGSSVQEMPWEMHKLTSLRTLRDFIVSANSPRLRDLAGLSNLKTLSISKLQNVASAENASDCKLIEMKSLDNLILQWDNGIDGYEEDEIEVLEDLKPHRDLERLRIEYFNGARFSNWLGDPSYQALQSVTLRHCGNCTSLPTLGLLPLLKDLFIEGFTKVSSIGLEFYGEMTTSHMPFQSLESLQFCDMLEWRKWNIPEGIEFPCLIKLCIIHCPKLVKGLPKQLDSLKKLEIFRCYDLMASLPKVPNTCELLVQESNETLMRNAAKSPSQASSRRVSISEELDITRKSYSRFLDSHIVSDIEETPHEARMETDSARSRSSSLDSSSSYTPPGSPISTADIPTTAQEAVLPLSDATTTVKEDTFSKEDLDDPRSSFEILKVSTVFQLKSLPQKLHTLKIVGCESLEALPDDLLGRITTLRELYLVSCSSLKSLPSLGFVATLYIRNCRNLEDLSSLESKKQLDFLQHLFIGSSCDSLKTLNLDLFLELKIICIWDCPNLQSVNFTREFKGDLASLESLEIRDCPRLISFPEGGLHAPNLESIFLSNCKSLNKLPDAMNSLTSLKTLFLHRCPEIESFPLGGLPLSLILLSISYCDKLTPQKSWRLDTLESLNRLELEGGCMDMDSFPEDKLLPPNINSLRISTLKSLKKLHYRGFQHLNALQTLEIHCCDMLGSLPDEGLPSSLNQLCVEQCSLLTPRLKPKRGKEWHKQLHLHRCCDSLVSFPLSLFTNLEDLQIQDCIILGVISSAQNSLTYLRKLKDCSKGMSSLMSLHISGLPSLTSLEHTGIQYVASLKIIKNKDCNKLASLALERLAHSLSHLTIRACPLLKVHCENDTGEYWSLVSHIPYRVIED 1495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271884g00023 1495 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 436 IPR027417 -
Stsc271884g00023 1495 Gene3D Ribonuclease Inhibitor 1277 1486 IPR032675 -
Stsc271884g00023 1495 Gene3D - 7 105 - -
Stsc271884g00023 1495 SUPERFAMILY L domain-like 496 881 - -
Stsc271884g00023 1495 MobiDBLite consensus disorder prediction 946 960 - -
Stsc271884g00023 1495 SUPERFAMILY L domain-like 1151 1480 - -
Stsc271884g00023 1495 Gene3D - 335 410 IPR042197 -
Stsc271884g00023 1495 Gene3D Ribonuclease Inhibitor 1138 1272 IPR032675 -
Stsc271884g00023 1495 PRINTS Disease resistance protein signature 373 387 - -
Stsc271884g00023 1495 PRINTS Disease resistance protein signature 609 625 - -
Stsc271884g00023 1495 PRINTS Disease resistance protein signature 199 214 - -
Stsc271884g00023 1495 PRINTS Disease resistance protein signature 272 286 - -
Stsc271884g00023 1495 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 1022 1241 - -
Stsc271884g00023 1495 SUPERFAMILY L domain-like 1029 1173 - -
Stsc271884g00023 1495 Gene3D - 418 506 IPR036388 -
Stsc271884g00023 1495 Gene3D Ribonuclease Inhibitor 1015 1102 IPR032675 -
Stsc271884g00023 1495 MobiDBLite consensus disorder prediction 946 983 - -
Stsc271884g00023 1495 Gene3D - 162 317 IPR027417 -
Stsc271884g00023 1495 FunFam Probable disease resistance protein At1g63360 422 506 - -
Stsc271884g00023 1495 Gene3D Ribonuclease Inhibitor 530 917 IPR032675 -
Stsc271884g00023 1495 MobiDBLite consensus disorder prediction 961 983 - -
Stsc271884g00023 1495 Pfam Rx N-terminal domain 6 84 IPR041118 -
Stsc271884g00023 1495 Pfam NB-ARC domain 197 399 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271884g00023 Stsc-Chr271884 172954 177644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271884g00023 563 674 WRKY Transcription Factor Family AT4G12020 32.743 2.12e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271884g00023 - - aip:107629658 1676.76