Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271883g00010 ATGAACTTCCAATCATGTTCATCATCATTTACCATCTTCAACTTTCTATGTCCTTGTTTTCTTCTTCTCTTCCTCTTCGCAACCACGGCTTCATGTAGCTGCACATGTGACACCACACAAACCGAACCCAATGACGGTTCAAATTCAACCCAATCAATTATTCATTACAAAATCATTTCAATCGCATCCGTTCTTTTGGCTGGCGCGCTCGGCGTGAGCCTTCCATTGGCAAGCAAAAGGATTCCGGCACTTAACCCTCAGAACGACATCTTCTTCATGATCAAGGCCTTTGCGGCGGGTGTCATTCTCTCGACCGGGTTCATTCATATTCTACCGGACGCGTTCGAGAGCCTGAACTCGCCGTGCCTCACGGCGGTTAAGCCGGTTTGGGGGAACTTCCCTTTTGCTGCTTTGGTTGCCATGCTAGCTTCCATTGGAACTTTGATGGTGGATTCTTTTGCCAGTGGGTATTATCATAGGCAACACTTTAACATTTCAAAGCAGGTTCCTGCTGCTGATGAAGAAAAGGGTGACCATGGGCATGGTCATAGTGATGATGGTCATGCCGGTCACATACATGTTCATACACATGCCACACATGGTCATGCTCATGGTTCAGCTAATTCTTCTGATGCTTTGGTAACATCTGAACTAATCAGGAAGAGAATCATATCACAAGTGTTGGAGATAGGAATAGTAGTCCATTCAGTGATAATTGGAATATCTTTGGGAACTGCAAATAGCATTGATACCATTAAGCCTCTCTTGGTAGCTCTCTCTTTTCATCAATTCTTTGAGGGCATGGGCCTTGGTGGTTGCATCTCTCAGGCAAAGTTTGAGTCTAGATCAACAGCAATTATGGCAACCTTTTTCTCCCTAACAACCCCAATTGGAATAGCAATTGGGATGGGGATATCAAGTGTGTACAAAGAGAATAGCCCAACATCTCTAATTGTTGAAGGGGTCTTCAATTCAGCTTCTGCTGGAATCCTCATTTACATGGCACTTGTTGATCTTCTAGCAGCAGATTTTATGAGTCCAAAGTTGCAAAATAATTTGAAGCTCCAATTAGGAGCTAATATCTCACTTCTCTTAGGTGCAGGTTGCATGTCACTATTGGCCAAATGGGCCTAG 1134 0.4409 MNFQSCSSSFTIFNFLCPCFLLLFLFATTASCSCTCDTTQTEPNDGSNSTQSIIHYKIISIASVLLAGALGVSLPLASKRIPALNPQNDIFFMIKAFAAGVILSTGFIHILPDAFESLNSPCLTAVKPVWGNFPFAALVAMLASIGTLMVDSFASGYYHRQHFNISKQVPAADEEKGDHGHGHSDDGHAGHIHVHTHATHGHAHGSANSSDALVTSELIRKRIISQVLEIGIVVHSVIIGISLGTANSIDTIKPLLVALSFHQFFEGMGLGGCISQAKFESRSTAIMATFFSLTTPIGIAIGMGISSVYKENSPTSLIVEGVFNSASAGILIYMALVDLLAADFMSPKLQNNLKLQLGANISLLLGAGCMSLLAKWA 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271883g00010 377 MobiDBLite consensus disorder prediction 170 191 - -
Stsc271883g00010 377 Pfam ZIP Zinc transporter 56 374 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Stsc271883g00010 377 NCBIfam ZIP zinc/iron transport family 44 377 IPR004698 GO:0005385|GO:0016020|GO:0071577
Stsc271883g00010 377 PANTHER ZINC/IRON TRANSPORTER 55 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271883g00010 Stsc-Chr271883 148732 155296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271883g00010 17 377 Inorganic Solute Cotransporters AT3G12750 58.466 3.65e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271883g00010 K14709 - gmx:100805124 489.96