Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271882g00027 ATGGACCCATTTGTGATCCTCACATGCCGTAGTCAGACACAACAAAGCAGCGTTGCATCAAACCAGGGGTCGAATCCAGAGTGGAATGAGACGTTTGTGTTCAACGTGTCTGATGGAGTTAAAGATATCCAATTGAAGATCATGGACCAAGATCTCGGCTCATGTGATGACTTTGTTGGAGAAGTAACCATTCCCCTGGCTGCGGTGTTTGCTGAAGGAAGCGTCCCACCTCATCCTTACACAGTTGTCAAGAATGGTCACTATTGTGGGGAGATTAAACTTGGCCTAAAATTTATGCAAGAGGAACGCCATGATCGGGGTATGGCAGAGGAAAATTTTGGCGGATGGAAGCACTCTGCTGCTTATTACTGA 372 0.4651 MDPFVILTCRSQTQQSSVASNQGSNPEWNETFVFNVSDGVKDIQLKIMDQDLGSCDDFVGEVTIPLAAVFAEGSVPPHPYTVVKNGHYCGEIKLGLKFMQEERHDRGMAEENFGGWKHSAAYY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271882g00027 123 PANTHER C2 DOMAIN-CONTAINING 1 102 - -
Stsc271882g00027 123 ProSiteProfiles C2 domain profile. 1 80 IPR000008 -
Stsc271882g00027 123 SMART C2_3c 2 78 IPR000008 -
Stsc271882g00027 123 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 100 IPR035892 -
Stsc271882g00027 123 Gene3D C2 domain 1 100 IPR035892 -
Stsc271882g00027 123 Pfam C2 domain 1 78 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271882g00027 Stsc-Chr271882 156503 157299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271882g00027 2 113 C2H2 Transcription Factor Family AT4G21160 27.679 3.44e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271882g00027 - - tcc:18606483 163.696