Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271882g00016 ATGGAGAACCAGCAAATAATGTCATCATCATCTGATTTTAAGGTATCTAACGGTAGTTTTCTTCAAGTTAAGAAAGGAGATATTCTAAGAACTCCAAATAATAAAGAATCATCAAGCAAGAAAAGTGGGAAAGAGATGAAGAAGCAGCACAGATATGTGTTTCAAACAAGGAGTCATGTTGATATACTTGATGATGGTTACCGCTGGAGAAAATATGGGGAAAAGGCTGTCAAAAACAATAAATTCCCCAGGAGTTACTATAGATGCTCATATAGAGGGTGCAATGTGAAGAAACAAATCCAACGGCAATCGATGGACGAGCAGGTGGTGGTAACAACCTATGAAGGGGTCCATATTCACCCTGTCCAGAAGTCTACTGAAAGCTTCGAGCAGATCTTGAGAAACTTTCAATCCACAACCATGTCCATGTCCAACGCTATTATGTATCTCCAACAACCTAATTAG 465 0.3914 MENQQIMSSSSDFKVSNGSFLQVKKGDILRTPNNKESSSKKSGKEMKKQHRYVFQTRSHVDILDDGYRWRKYGEKAVKNNKFPRSYYRCSYRGCNVKKQIQRQSMDEQVVVTTYEGVHIHPVQKSTESFEQILRNFQSTTMSMSNAIMYLQQPN 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271882g00016 154 SMART WRKY_cls 63 122 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc271882g00016 154 Gene3D WRKY domain 50 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc271882g00016 154 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 137 IPR044810 GO:0003700
Stsc271882g00016 154 SUPERFAMILY WRKY DNA-binding domain 55 122 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc271882g00016 154 MobiDBLite consensus disorder prediction 24 50 - -
Stsc271882g00016 154 Pfam WRKY DNA -binding domain 64 120 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc271882g00016 154 ProSiteProfiles WRKY domain profile. 58 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc271882g00016 154 FunFam WRKY transcription factor 57 49 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271882g00016 Stsc-Chr271882 86599 87401 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271882g00016 51 137 WRKY Transcription Factor Family AT5G13080 78.161 6.07e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc271882g00016 WRKY 3.4e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271882g00016 - - gmx:100127378 191.815