Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271882g00003 ATGAACTTCGTGAAGAAGTGTAAGAGGGTATTGGGAAGCAACAACAGCAGCGGTGAAGAGAACAGTGGCAAGTATGGGAGATTATATTCAGAGAAGAAGAAGAAGAAGGCGGAAACTACTCCACAGGGTTGTTTCTGTGTGTACGTCGGAGAAGAAAGGCAGCGGTTCGTGATGAAGATAAAGCACGCGAATCATCCATTGTTCAAGGCCTTATTGGATGCTGCTGAAACTGAATACGGTTACAGAAACGATGGACCACTCTGCCTCCCTTGCGACGTTGACTTCTTCTGCGAGGCACTTTCTGAGATCCAGAATAGCACTTCTTCTTCTCTGGGTTGTGCCTTCCATCACGCTGATAACGCACGCTCTTCTTCTTCTTCTTCTCCTTCATCGGTTTTCCAGAGTCCGTTGTCTTATCATTCTAATCACAGTTATTAA 438 0.4566 MNFVKKCKRVLGSNNSSGEENSGKYGRLYSEKKKKKAETTPQGCFCVYVGEERQRFVMKIKHANHPLFKALLDAAETEYGYRNDGPLCLPCDVDFFCEALSEIQNSTSSSLGCAFHHADNARSSSSSSPSSVFQSPLSYHSNHSY 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271882g00003 145 Pfam Auxin responsive protein 6 101 IPR003676 GO:0009733
Stsc271882g00003 145 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 33 98 IPR003676 GO:0009733
Stsc271882g00003 145 MobiDBLite consensus disorder prediction 121 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271882g00003 Stsc-Chr271882 8176 8911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271882g00003 40 110 Calmodulin-binding Proteins AT4G34750 46.479 1.19e-18 75.5