Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc271882g00002 ATGCAAAACTCAGTTCCTGCTATCACTTTCATCTTGGCCTTAACTTTAAGACTTGAGAAAGTGAACATGACAAGAAAAAATGGATTAGCAAAAGTTATAGGAACCATTGCAAGTGTTGGTGGTGCCACCATTATTACTCTATACAAAGGTCCTCCTCTTCTTCACCAAACACATGGAAGCAGAAGCACCTTACAAGGAGATCATAATTTTGAAGAAATGCAGCAAAATTGGAGATGGGGTTGCATATACTTGCTTGGACAATGTTTTTCATGGGCTGGTTGGATGGTTTTTCAGGCTCCTGTGGTGAAGAAGTATCCGGCGAAACTATCGCTCACGGCGTTCACATGCTTCTTCGGATTGATCCAATTCTTGATCATAGCAGCGTTTGTAGAAACTGACTTACAAAATTGGAAGATAGCATCATTGCAGGAGCTTTTCCTCATTCTATATGTTGTAATCAATATTTTCCTAACTTCCAACTATCAAATATTAATAAATACTTCTATAAAATGTTAA 516 0.3779 MQNSVPAITFILALTLRLEKVNMTRKNGLAKVIGTIASVGGATIITLYKGPPLLHQTHGSRSTLQGDHNFEEMQQNWRWGCIYLLGQCFSWAGWMVFQAPVVKKYPAKLSLTAFTCFFGLIQFLIIAAFVETDLQNWKIASLQELFLILYVVINIFLTSNYQILINTSIKC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc271882g00002 171 PANTHER WAT1-RELATED PROTEIN 1 155 IPR030184 GO:0016020|GO:0022857
Stsc271882g00002 171 Pfam EamA-like transporter family 79 168 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc271882g00002 Stsc-Chr271882 2182 3506 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc271882g00002 1 153 Nodulin-like Gene Family AT3G18200 59.740 3.39e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc271882g00002 - - qsa:O6P43_005135 234.958